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Nucleoprotein 3D structures: Difference between revisions

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*Nucleoprotein from SARS-Covid 2
*Nucleoprotein from SARS-Covid 2


**[[8fd5]], [[8fg2]] - ScvNP 1-419 – SARS coronavirus 2 – Cryo EM<br />
**[[6vyo]], [[6wkp]], [[6yi3]], [[7cdz]], [[4j3k]], [[5n4k]], [[2ofz]], [[2og3]], [[6m3m]], [[7cdz]], [[7uw3]], [[7vbd]], [[7vbf]], [[7vnu]], [[7xx1]] - ScvNP N terminal 45-181 <br />
**[[6vyo]], [[6wkp]], [[6yi3]], [[7cdz]], [[4j3k]], [[5n4k]], [[2ofz]], [[2og3]], [[6m3m]], [[7cdz]], [[7uw3]], [[7vbd]], [[7vbf]], [[7vnu]], [[7xx1]] - ScvNP N terminal 45-181 <br />
**[[1ssk]], [[7sd4]] - ScvNP N terminal – NMR<br />
**[[1ssk]], [[7sd4]] - ScvNP N terminal – NMR<br />
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**[[4h5l]], [[4csg]], [[5fva]] – TvRNP – Toscana virus<br />
**[[4h5l]], [[4csg]], [[5fva]] – TvRNP – Toscana virus<br />
**[[4csf]] – TvRNP + RNA<br />
**[[4csf]] – TvRNP + RNA<br />
**[[8bpk]] – TvRNP + nanobody<br />
**[[8rcq]] – TvRNP + nanobody<br />
**[[4uft]] – MevRNP + RNA <br />
**[[4uft]] – MevRNP + RNA <br />


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**[[2a3j]], [[1fht]] - h-snRNP U1 A RRM – human - NMR<br />
**[[2a3j]], [[1fht]] - h-snRNP U1 A RRM – human - NMR<br />
**[[7lhx]] - h-snRNP U1 A  (mutant) <br />
**[[2u1a]] - h-snRNP U1 A RRM (mutant) – NMR<br />
**[[2u1a]] - h-snRNP U1 A RRM (mutant) – NMR<br />
**[[1dz5]] - h-snRNP U1 A  (mutant) – NMR<br />
**[[1dz5]] - h-snRNP U1 A  (mutant) – NMR<br />
**[[1oia]] - h-snRNP U1 A RRM<br />
**[[1oia]] - h-snRNP U1 A RRM<br />
**[[7aep]] - h-snRNP U1 A RRM2 190-282 – NMR<br />
**[[2l5i]], [[2l5j]] - h-snRNP U1 70kDa residues 131-151 – NMR<br />
**[[2l5i]], [[2l5j]] - h-snRNP U1 70kDa residues 131-151 – NMR<br />
**[[2vy4]], [[2vy5]] - h-snRNP U11/U12 – NMR<br />
**[[2vy4]], [[2vy5]] - h-snRNP U11/U12 – NMR<br />
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**[[4wzj]] – h-snRNP  U4 core domain<br />  
**[[4wzj]] – h-snRNP  U4 core domain<br />  
**[[3p49]] - h-snRNP A RRM + glycine riboswitch RNA<br />
**[[3p49]] - h-snRNP A RRM + glycine riboswitch RNA<br />
**[[3iwn]] - h-snRNP U1 A RRM (mutant) + riboswitch RNA<br />
**[[3iwn]], [[7d7v]] - h-snRNP U1 A RRM (mutant) + riboswitch RNA<br />
**[[3pgw]], [[3mum]], [[3mur]], [[3mut]], [[3muv]], [[3egz]] - h-snRNP U1 A + DNA riboswitch<br />
**[[3pgw]], [[3mum]], [[3mur]], [[3mut]], [[3muv]], [[3egz]] - h-snRNP U1 A + DNA riboswitch<br />
**[[3mxh]], [[3irw]] - h-snRNP U1 A (mutant) + DNA riboswitch<br />
**[[3mxh]], [[3irw]] - h-snRNP U1 A (mutant) + DNA riboswitch<br />
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**[[3cul]], [[3cun]] - h-snRNP U1 A (mutant) + aminoacyl-tRNA synthetase ribozyme<br />
**[[3cul]], [[3cun]] - h-snRNP U1 A (mutant) + aminoacyl-tRNA synthetase ribozyme<br />
**[[2ozb]], [[3siu]], [[3siv]] - h-snRNP U4/U6 + NHP2-like protein + RNA<br />
**[[2ozb]], [[3siu]], [[3siv]] - h-snRNP U4/U6 + NHP2-like protein + RNA<br />
**[[7px3]] - h-snRNP U5 + PRP8 + TSSC4 = Cryo EM<br />
**[[2bn5]] - Dm-snRNP U1 70kDa + PSI B box – NMR<br />
**[[2bn5]] - Dm-snRNP U1 70kDa + PSI B box – NMR<br />
**[[6f4h]] - Dm-snRNP U1 A + U1-SL2<br />
**[[6f4h]] - Dm-snRNP U1 A + U1-SL2<br />
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**[[3cw1]] - h-snRNP U1 in spliceosome<br />
**[[3cw1]] - h-snRNP U1 in spliceosome<br />
**[[5o9z]], [[5z58]], [[6ah0]], [[6ff7]], [[6icz]], [[6id0]], [[6id1]] - h-snRNP in spliceosome – Cryo EM<br />
**[[5o9z]], [[5z58]], [[6ah0]], [[6ff7]], [[6icz]], [[6id0]], [[6id1]], [[7a5p]], [[7aav]], [[7abf]], [[7abg]], [[7abi]], [[7dvq]], [[7qtt]], [[7vpx]], [[7w5b]], [[8c6j]], [[8ch6]], [[8hk1]]  - h-snRNP in spliceosome – Cryo EM<br />
**[[5xjq]], [[5xjr]], [[5xjs]], [[5xjt]], [[5xju]], [[5xjl]] - h-snRNP in SMN<br />
**[[5xjq]], [[5xjr]], [[5xjs]], [[5xjt]], [[5xju]], [[5xjl]] - h-snRNP in SMN<br />
**[[4m77]], [[4m78]], [[4m7a]], [[4m7d]] - h-snRNP in LSM8 assembly<br />
**[[4m77]], [[4m78]], [[4m7a]], [[4m7d]] - h-snRNP in LSM8 assembly<br />
**[[6v4x]] - h-snRNP in pre-mRNA 3’-end processing – Cryo EM<br />
**[[6v4x]] - h-snRNP in pre-mRNA 3’-end processing – Cryo EM<br />
**[[6y53]], [[6y5q]] - h-snRNP in 17S U2 snRNP – Cryo EM<br />
**[[7w59]] - h-snRNP in pre-C*-I complex – Cryo EM<br />
**[[7w5a]] - h-snRNP in pre-C*-II complex – Cryo EM<br />
**[[7b0y]] - h-snRNP in RNA polymerase II-U1 complex – Cryo EM<br />
**[[6y53]], [[6y5q]], [[7evo]] - h-snRNP in 17S U2 snRNP – Cryo EM<br />
**[[4f7u]] - m-snRNP in 8S assembly<br />
**[[4f7u]] - m-snRNP in 8S assembly<br />
**[[5wsg]], [[5y88]], [[5ylz]], [[5zwn]], [[5zwo]], [[6bk8]], [[6exn]], [[6g90]], [[6j6g]], [[6j6h]], [[6j6n]], [[6j6q]], [[6n7p]], [[6n7r]], [[6n7x]] - y-snRNP in spliceosome – Cryo EM<br />
**[[5wsg]], [[5y88]], [[5ylz]], [[5zwn]], [[5zwo]], [[6bk8]], [[6exn]], [[6g90]], [[6j6g]], [[6j6h]], [[6j6n]], [[6j6q]], [[6n7p]], [[6n7r]], [[6n7x]], [[7b9v]], [[7dco]], [[7oqc]], [[7oqe]] - y-snRNP in spliceosome – Cryo EM<br />


*'''Heterogenous nuclear ribonucleoprotein'''; Human domains – RRM1 10-93; RRM2 94-194; KH3 385-463; RRM3 654-729
*'''Heterogenous nuclear ribonucleoprotein'''; Human domains – RRM1 10-93; RRM2 94-194; KH3 385-463; RRM3 654-729


**[[1ha1]], [[1l3k]], [[1up1]] - h-hnRNP A1 RRM1-2<br />
**[[1ha1]], [[1l3k]], [[1up1]] - h-hnRNP A1 RRM1-2<br />
**[[7zj2]] - h-hnRNP A1 1-320 – Cryo EM<br />
**[[7bx7]] - h-hnRNP A1 188-320 – Cryo EM<br />
**[[2lyv]] - h-hnRNP A1 RRM 1-2 – NMR<br />
**[[2lyv]] - h-hnRNP A1 RRM 1-2 – NMR<br />
**[[2up1]] - h-hnRNP A1 RRM 1-2 + DNA<br />
**[[2up1]] - h-hnRNP A1 RRM 1-2 + DNA<br />
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**[[1wf2]] - h-hnRNP C1/C2 RRM1 – NMR<br />
**[[1wf2]] - h-hnRNP C1/C2 RRM1 – NMR<br />
**[[1hd0]], [[1hd1]], [[1iqt]] - h-hnRNP D0 RRM2 – NMR<br />
**[[1hd0]], [[1hd1]], [[1iqt]] - h-hnRNP D0 RRM2 – NMR<br />
**[[7zir]] - h-hnRNP DL – Cryo EM<br />
**[[2hgl]], [[2hgm]], [[2hgn]] - h-hnRNP F QRRM1 – NMR<br />
**[[2hgl]], [[2hgm]], [[2hgn]] - h-hnRNP F QRRM1 – NMR<br />
**[[1wg5]], [[1wez]], [[2lxu]] - h-hnRNP H RRM1 – NMR<br />
**[[1wg5]], [[1wez]], [[2lxu]] - h-hnRNP H RRM1 – NMR<br />
**[[7zug]] - h-hnRNP H1 RRM2 <br />
**[[6dg1]] - h-hnRNP H2 RRM2 – NMR<br />
**[[6dhs]] - h-hnRNP H2 RRM1-2<br />
**[[2ad9]], [[2adb]], [[2adc]] - h-hnRNP I – NMR<br />
**[[2ad9]], [[2adb]], [[2adc]] - h-hnRNP I – NMR<br />
**[[1zzk]] - h-hnRNP K KH3 domain<br />
**[[1zzk]] - h-hnRNP K KH3 domain<br />
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**[[1pgz]], [[1po6]] - h-hnRNP A1 RRM1-2+ DNA + inhibitor<br />
**[[1pgz]], [[1po6]] - h-hnRNP A1 RRM1-2+ DNA + inhibitor<br />
**[[1wtb]], [[1x0f]] - h-hnRNP D0 CTD 181-259 + DNA – NMR<br />
**[[1wtb]], [[1x0f]] - h-hnRNP D0 CTD 181-259 + DNA – NMR<br />
**[[6dg1]] - h-hnRNP H2 RRM2 – NMR<br />
**[[8sgh]] - h-hnRNP H2 103-225 + transportin<br />
**[[6dhs]] - h-hnRNP H2 RRM1-2<br />
**[[1zzi]], [[1zzj]], [[7cre]], [[7oqb]] - h-hnRNP K KH3 domain + DNA<br />
**[[1zzi]], [[1zzj]] - h-hnRNP K KH3 domain + DNA<br />
**[[1j5k]] - h-hnRNP K KH3 domain + DNA – NMR<br />
**[[1j5k]] - h-hnRNP K KH3 domain + DNA – NMR
**[[7cru]] - h-hnRNP K + importin<br />
**[[7evr]], [[7evs]] - h-hnRNP L RRM2+ SETD2<br />
}}
}}


[[Category:Topic Page]]
[[Category:Topic Page]]

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

Michal Harel, Jaime Prilusky, Joel L. Sussman
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