8vdk: Difference between revisions

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OCA

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-'''Unreleased structure'''
-The entry 8vdk is ON HOLD
+==Crystal Structure of LPXTG-motif Cell Wall Anchor Domain Protein MSCRAMM_SdrD from Staphylococcus aureus==
+<StructureSection load='8vdk' size='340' side='right'caption='[[8vdk]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
-Authors: Kim, Y., Tan, A., Endres, M., Joachimiak, A., Center for Structural Biology of Infectious Diseases (CSBID)
+== Structural highlights ==
+<table><tr><td colspan='2'>[[8vdk]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Staphylococcus_aureus_subsp._aureus_JH1 Staphylococcus aureus subsp. aureus JH1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8VDK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=8VDK FirstGlance]. <br>
-Description: Crystal Structure of LPXTG-motif Cell Wall Anchor Domain Protein MSCRAMM_SdrD from Staphylococcus aureus
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
-[[Category: Unreleased Structures]]
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
-[[Category: Tan, A]]
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=8vdk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=8vdk OCA], [https://pdbe.org/8vdk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=8vdk RCSB], [https://www.ebi.ac.uk/pdbsum/8vdk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=8vdk ProSAT]</span></td></tr>
-[[Category: Center For Structural Biology Of Infectious Diseases (Csbid)]]
+</table>
-[[Category: Joachimiak, A]]
+== Function ==
-[[Category: Kim, Y]]
+[https://www.uniprot.org/uniprot/SDRD_STAAM SDRD_STAAM] Cell surface-associated calcium-binding protein which plays an important role in adhesion and pathogenesis. Mediates interactions with components of the extracellular matrix such as host DSG1 to promote bacterial adhesion to host cells. Contributes to the resistance to killing by innate immune components such as neutrophils present in blood and thus attenuates bacterial clearance.[UniProtKB:Q2G0L4]
-[[Category: Endres, M]]
+__TOC__
+</StructureSection>
+[[Category: Large Structures]]
+[[Category: Staphylococcus aureus subsp. aureus JH1]]
+[[Category: Endres M]]
+[[Category: Joachimiak A]]
+[[Category: Kim Y]]
+[[Category: Tan A]]