8sd5: Difference between revisions

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New page: '''Unreleased structure''' The entry 8sd5 is ON HOLD Authors: Description: Category: Unreleased Structures
 
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'''Unreleased structure'''


The entry 8sd5 is ON HOLD
==Crystal structure of HPPK from Methanocaldococcus jannaschii==
 
<StructureSection load='8sd5' size='340' side='right'caption='[[8sd5]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
Authors:  
== Structural highlights ==
 
<table><tr><td colspan='2'>[[8sd5]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Methanocaldococcus_jannaschii Methanocaldococcus jannaschii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8SD5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=8SD5 FirstGlance]. <br>
Description:  
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.802&#8491;</td></tr>
[[Category: Unreleased Structures]]
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=8sd5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=8sd5 OCA], [https://pdbe.org/8sd5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=8sd5 RCSB], [https://www.ebi.ac.uk/pdbsum/8sd5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=8sd5 ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/MPTE_METJA MPTE_METJA] Catalyzes the transfer of diphosphate from ATP to 6-hydroxymethyl-7,8-dihydropterin (6-HMD), leading to 6-hydroxymethyl-7,8-dihydropterin diphosphate (6-HMDP).[HAMAP-Rule:MF_02131]<ref>PMID:22931285</ref>
== References ==
<references/>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Methanocaldococcus jannaschii]]
[[Category: Cherry S]]
[[Category: Ji X]]
[[Category: Needle D]]
[[Category: Shaw GX]]
[[Category: Stair NR]]
[[Category: Tropea JE]]
[[Category: Waugh DS]]

Latest revision as of 10:17, 3 July 2024

Crystal structure of HPPK from Methanocaldococcus jannaschiiCrystal structure of HPPK from Methanocaldococcus jannaschii

Structural highlights

8sd5 is a 4 chain structure with sequence from Methanocaldococcus jannaschii. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.802Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

MPTE_METJA Catalyzes the transfer of diphosphate from ATP to 6-hydroxymethyl-7,8-dihydropterin (6-HMD), leading to 6-hydroxymethyl-7,8-dihydropterin diphosphate (6-HMDP).[HAMAP-Rule:MF_02131][1]

References

  1. ↑ de Crecy-Lagard V, Phillips G, Grochowski LL, El Yacoubi B, Jenney F, Adams MW, Murzin AG, White RH. Comparative genomics guided discovery of two missing archaeal enzyme families involved in the biosynthesis of the pterin moiety of tetrahydromethanopterin and tetrahydrofolate. ACS Chem Biol. 2012 Nov 16;7(11):1807-16. doi: 10.1021/cb300342u. Epub 2012 Sep, 7. PMID:22931285 doi:http://dx.doi.org/10.1021/cb300342u

8sd5, resolution 2.80Å

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