7td6: Difference between revisions

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-'''Unreleased structure'''
-The entry 7td6 is ON HOLD
+==aRML prion fibril==
+<StructureSection load='7td6' size='340' side='right'caption='[[7td6]], [[Resolution|resolution]] 3.00&Aring;' scene=''>
+== Structural highlights ==
+<table><tr><td colspan='2'>[[7td6]] is a 5 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7TD6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7TD6 FirstGlance]. <br>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 3&#8491;</td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7td6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7td6 OCA], [https://pdbe.org/7td6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7td6 RCSB], [https://www.ebi.ac.uk/pdbsum/7td6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7td6 ProSAT]</span></td></tr>
+</table>
+== Disease ==
+[https://www.uniprot.org/uniprot/PRIO_MOUSE PRIO_MOUSE] Note=Found in high quantity in the brain of humans and animals infected with degenerative neurological diseases such as kuru, Creutzfeldt-Jakob disease (CJD), Gerstmann-Straussler syndrome (GSS), scrapie, bovine spongiform encephalopathy (BSE), transmissible mink encephalopathy (TME), etc.
+== Function ==
+[https://www.uniprot.org/uniprot/PRIO_MOUSE PRIO_MOUSE] May play a role in neuronal development and synaptic plasticity. May be required for neuronal myelin sheath maintenance. May play a role in iron uptake and iron homeostasis. Soluble oligomers are toxic to cultured neuroblastoma cells and induce apoptosis (in vitro) (By similarity). Association with GPC1 (via its heparan sulfate chains) targets PRNP to lipid rafts. Also provides Cu(2+) or ZN(2+) for the ascorbate-mediated GPC1 deaminase degradation of its heparan sulfate side chains.<ref>PMID:12732622</ref> <ref>PMID:16492732</ref> <ref>PMID:19242475</ref> <ref>PMID:19568430</ref>
+<div style="background-color:#fffaf0;">
+== Publication Abstract from PubMed ==
+Little is known about the structural basis of prion strains. Here we provide a high (3.0 A) resolution cryo-electron microscopy-based structure of infectious brain-derived fibrils of the mouse anchorless RML scrapie strain which, like the recently determined hamster 263K strain, has a parallel in-register beta-sheet-based core. Several structural motifs are shared between these ex vivo prion strains, including an amino-proximal steric zipper and three beta-arches. However, detailed comparisons reveal variations in these shared structural topologies and other features. Unlike 263K and wildtype RML prions, the anchorless RML prions lack glycophosphatidylinositol anchors and are severely deficient in N-linked glycans. Nonetheless, the similarity of our anchorless RML structure to one reported for wildtype RML prion fibrils in an accompanying paper indicates that these post-translational modifications do not substantially alter the amyloid core conformation. This work demonstrates both common and divergent structural features of prion strains at the near-atomic level.
-Authors: Hoyt, F., Standke, H.G., Artikis, E., Caughey, B., Kraus, A.
+Cryo-EM structure of anchorless RML prion reveals variations in shared motifs between distinct strains.,Hoyt F, Standke HG, Artikis E, Schwartz CL, Hansen B, Li K, Hughson AG, Manca M, Thomas OR, Raymond GJ, Race B, Baron GS, Caughey B, Kraus A Nat Commun. 2022 Jul 13;13(1):4005. doi: 10.1038/s41467-022-30458-6. PMID:35831291<ref>PMID:35831291</ref>
-Description: aRML prion fibril
+From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-[[Category: Unreleased Structures]]
+</div>
-[[Category: Artikis, E]]
+<div class="pdbe-citations 7td6" style="background-color:#fffaf0;"></div>
-[[Category: Hoyt, F]]
-[[Category: Caughey, B]]
+==See Also==
-[[Category: Standke, H.G]]
+*[[Prion 3D structures|Prion 3D structures]]
-[[Category: Kraus, A]]
+== References ==
+<references/>
+__TOC__
+</StructureSection>
+[[Category: Large Structures]]
+[[Category: Mus musculus]]
+[[Category: Artikis E]]
+[[Category: Caughey B]]
+[[Category: Hoyt F]]
+[[Category: Kraus A]]
+[[Category: Standke HG]]