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Rhodopsin 3D structures: Difference between revisions

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*Rhodopsin (Rn)
*Rhodopsin (Rn)


**[[5te5]], [[5te3]] – bRn - bovine<br />
**[[3cap]], [[5te3]], [[5te5]] – bRn - bovine<br />
**[[6ofj]] – bRn – Cryo EM<br />
**[[6ofj]] – bRn – Cryo EM<br />
**[[2j4y]], [[4bez]] - bRn (mutant)<br />
**[[1vqx]], [[1nzs]] – bRn C terminal – NMR<BR />
**[[1vqx]], [[1nzs]] – bRn C terminal – NMR<BR />
**[[1edx]] - bRn N terminal – NMR<BR />
**[[1edx]] - bRn N terminal – NMR<BR />
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**[[1fdf]] – bRn helix 7 - NMR<BR />
**[[1fdf]] – bRn helix 7 - NMR<BR />
**[[3qc9]] – bRn + Mg + ADP<br />
**[[3qc9]] – bRn + Mg + ADP<br />
**[[3oax]], [[3c9l]], [[2ped]], [[2i35]], [[2i36]], [[2i37]], [[1u19]], [[1gzm]], [[1l9h]], [[1hzx]] - bRn + retinal<br />
**[[1f88]], [[1gzm]], [[1hzx]], [[1jfp]], [[1l9h]], [[1u19]], [[2i35]], [[2i36]], [[2i37]], [[2ped]], [[3c9l]], [[3oax]] - bRn + retinal<br />
**[[6fk6]], [[6fk7]], [[6fk8]], [[6fk9]], [[6fka]], [[6fkb]], [[6fkc]], [[6fkd]], [[5dys]] - bRn (mutant) + detergents + retinal derivative<br />
**[[7zbc]], [[7zbe]], [[8a6c]], [[8a6d]], [[8a6e]] - bRn + detergents + retinal – cubic phase<br />
**[[7zbc]], [[7zbe]], [[8a6c]], [[8a6d]], [[8a6e]] - bRn + detergents + retinal – cubic phase<br />
**[[3cap]], [[5te3]] - bRn <br />
**[[3cap]], [[5te3]] - bRn <br />
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**[[2hpy]] - bLRn + retinal<br />
**[[2hpy]] - bLRn + retinal<br />


*Halorhodopsin
*Halorhodopsin see [[Bacteriorhodopsin]]
 
**[[1e12]], [[2jaf]], [[5ahy]], [[5ahz]] - HRn + detergents + retinal – ''Halobacterium salinarium''<br />
**[[2jag]] - HRn (mutant) + detergents + retinal<br />
**[[3a7k]], [[3abw]], [[3qbg]], [[3qbi]], [[3qbk]], [[3qbl]], [[3vvk]] – NpRn + detergents + retinal<br />
 
*Archaerhodopsin
 
**[[1uaz]] – HRn-1 + retinal – ''Halobacterium'' <br />
**[[1vgo]], [[2z55]], [[3wqj]] - HRn-2 + retinal<br />
**[[2ei4]] - HRn-2 + retinal + bacterioruberin<br />


*Proteorhodopsin
*Archaerhodopsin see [[Bacteriorhodopsin]]


**[[2l6x]] - GpPRn + detergents + retinal – ''Gamma proteobacterium''<br />
*Proteorhodopsin see [[Bacteriorhodopsin]]
**[[4kly]], [[4knf]] - GpPRn + retinal<br />
**[[4jq6]] – PRn + retinal + lipid<br />


*Xanthorhodopsin
*Xanthorhodopsin see [[Bacteriorhodopsin]]
 
**[[3ddl]] - XRn + detergents + retinal – ''Salinibacter ruber''<br />


*Bestrhodopsin (Rn-Rn-bestrophin)
*Bestrhodopsin (Rn-Rn-bestrophin)
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**[[7pl9]] - Rn + retinal – ''Phaeocystis'' – Cryo EM<br />
**[[7pl9]] - Rn + retinal – ''Phaeocystis'' – Cryo EM<br />


*Deltarhodopsin
*Deltarhodopsin see [[Bacteriorhodopsin]]
 
**[[4fbz]] - Rn + bacterioruberin + retinal – ''Haloterrigena thermotolerans''<br />


*Cyanorhodopsin
*Cyanorhodopsin

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

Michal Harel, Joel L. Sussman
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