Asparaginase 3D structures: Difference between revisions

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New page: ==3D structures of asparaginase== Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}} {{#tree:id=OrganizedByTopic|openlevels=0| *ASP I **1hfj, 1hfk, [[1...
 
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==3D structures of asparaginase==
==3D structures of [[Asparaginase]]==


Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}}
Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}}
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*ASP I
*ASP I


**[[4pvq]], [[4et0]] - hASP – human<br />
**[[3tkj]] - hASP (mutant) <br />
**[[4pv2]], [[4pv3]] – bASP – bean<br />
**[[2gez]] - ASP – yellow lupine<br />
**[[1hfj]], [[1hfk]], [[1o7j]] - ErcASP – ''Erwinia chrysanthemi''<br />
**[[1hfj]], [[1hfk]], [[1o7j]] - ErcASP – ''Erwinia chrysanthemi''<br />
**[[1wnf]], [[1wls]] - ASP – ''Pyrococcus horikoshii''<br />
**[[1wnf]], [[1wls]] - ASP – ''Pyrococcus horikoshii''<br />
**[[1zcf]] - PaASP – ''Pectobacterium atrosepticum''<br />
**[[1zcf]] - PaASP – ''Pectobacterium atrosepticum''<br />
**[[2gez]] - ASP – yellow lupine<br />
**[[2ocd]] - ASP – ''Vibrio cholera''<br />
**[[2ocd]] - ASP – ''Vibrio cholera''<br />
**[[2p2d]] - EcASP – ''Eschericia coli''<br />
**[[2p2d]] - EcASP – ''Eschericia coli''<br />
**[[3ntx]] - ASP – ''Yersinia pestis''<br />
**[[3ntx]] - YpASP – ''Yersinia pestis''<br />
**[[7r69]], [[7r6a]], [[7r6b]] – YpASP (mutant) <br />
**[[3nxk]] - ASP – ''Campylobacter jejuni''<br />
**[[3nxk]] - ASP – ''Campylobacter jejuni''<br />
**[[4pvq]], [[4et0]] - hASP – human<br />
**[[3tkj]] - hASP (mutant) <br />
**[[4pu6]], [[4pv2]], [[4pv3]] – ASP – bean<br />
**[[4q0m]], [[4ra6]], [[4ra9]], [[5cbp]] – PfASP – ''Pyrococcus furiosus''<br />
**[[4q0m]], [[4ra6]], [[4ra9]], [[5cbp]] – PfASP – ''Pyrococcus furiosus''<br />
**[[5ot0]] - ASP – ''Thermococcus kodakarensis'' <br />
**[[5ot0]] - ASP – ''Thermococcus kodakarensis'' <br />
**[[6rud]] – WsASP - ''Wolinella succinogenes'' <br />
**[[6syh]] – WsASP (mutant)  <br />
**[[7cb4]] – BpASP – ''Bacillus paralicheniformis''<br />
**[[7cbw]], [[8h44]], [[8h45]], [[8h47]], [[8h49]], [[8h4a]], [[8h4c]], [[8h4d]], [[8h4g]] – BpASP (mutant) <br />
**[[8uoo]], [[8uor]], [[8uow]], [[8up3]], [[8up7]], [[8up9]], [[8upc]] – RrASP (mutant) – ''Rhodospirillum rubrum''<br />
**[[9d91]] – ASP – Streptococcus pneumoniae<br />
**[[8wgq]] – DcASP – ''Dickeya chrysanthemi'' <br />


*ASP I complex
*ASP I complex


**[[4pvp]] - hASP + malonate<br />
**[[4pvq]] - hASP + sulfate<br />
**[[4pvr]], [[4pvs]] - hASP + AA<BR />
**[[5dne]], [[5dnd]], [[5dnc]] – gpASP (mutant) + asparagine – guinea pig<br />
**[[1hfw]], [[5hw0]] - ErcASP + glutamate<br />
**[[1hfw]], [[5hw0]] - ErcASP + glutamate<br />
**[[4pu6]] - bASP + Asp<br />
**[[2hln]] - PaASP + glutamate<br />
**[[2hln]] - PaASP + glutamate<br />
**[[1hg0]] - ErcASP + succinate<br />
**[[1hg0]] - ErcASP + succinate<br />
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**[[2him]], [[2zal]] - EcASP + AA<BR />  
**[[2him]], [[2zal]] - EcASP + AA<BR />  
**[[2p2n]] - EcASP + asparagine + AA<BR />  
**[[2p2n]] - EcASP + asparagine + AA<BR />  
**[[6nxc]], [[6nxd]] - EcASP + Asn + citrate<br />
**[[1jsl]], [[1jsr]] - ErcASP + norleucine<br />
**[[1jsl]], [[1jsr]] - ErcASP + norleucine<br />
**[[4pvp]] - hASP + malonate<br />
**[[4pvp]] - hASP + sulfate<br />
**[[4pvr]], [[4pvs]] - hASP + AA<BR />
**[[4nje]] – ASP + Asp – ''Pyrococcus horikoshii''<br />
**[[4nje]] – ASP + Asp – ''Pyrococcus horikoshii''<br />
**[[5b5u]], [[5b74]] - PfLASP + peptide<br />
**[[5b5u]], [[5b74]] - PfLASP + peptide<br />
**[[5i3z]] - ASP (mutant) + Asp – ''Dickeya chrysanthemi'' <br />
**[[5i3z]], [[6pae]], [[7u6m]] - DcASP (mutant) + Asp <br />
**[[5k4g]] - WsASP + L-Asp - ''Wolinella succinogenes'' <br />
**[[5k4g]] - WsASP + L-Asp <br />
**[[5k3o]] - WsASP (mutant) + L-Asp <br />
**[[5k3o]], [[6rue]], [[6ruf]] - WsASP (mutant) + L-Asp <br />
**[[5k4h]] - WsASP + L-Glu <br />
**[[5k4h]] - WsASP + L-Glu <br />
**[[5k45]] - WsASP (mutant) + L-Glu <br />
**[[5k45]] - WsASP (mutant) + L-Glu <br />
**[[5dne]], [[5dnd]], [[5dnc]] – ASP (mutant) + asparagine – guinea pig<br />
**[[7c8q]], [[7c91]], [[7cbr]], [[8h4f]] - BpASP (mutant) + D-Asn <br />
**[[7c8x]], [[7cbu]], [[8h46]], [[8h48]], [[8h4b]], [[8h4e]] - BpASP (mutant) + L-AA <br />
**[[8uou]], [[8up6]], [[8up8]] - RrASP (mutant) + L-AA <br />


*ASP II
*ASP II
   
   
**[[1wsa]] – WsASP precursor <br />
**[[1wsa]] – WsASP precursor <br />
**[[6eok]] - EcASP (mutant)<br />
**[[6eok]], [[6uod]], [[7a0u]], [[7p9c]], [[7qy6]] - EcASP (mutant)<br />
**[[1ihd]], [[1jaz]], [[1jja]], [[5mq5]] - EcASP (mutant)
**[[1ihd]], [[1jaz]], [[1jja]], [[5mq5]], [[6eok]], [[7qq8]], [[7qsf]], [[7qtc]], [[7qvr]], [[7qym]], [[7qyx]], [[7r1g]], [[7r57]], [[7r5c]], [[8bi3]], [[8bkf]], [[8bp9]], [[8bqo]], [[8c0i]], [[8c23]] - EcASP (mutant)<br />
**[[7os3]], [[7os5]], [[7os6]], [[7ou1]], [[7oz6]], [[8cly]], [[8clz]], [[8col]], [[8osw]] - ReASP – ''Rhizobium etli'' <br />
**[[8rua]], [[8rud]], [[8rue]], [[8ruf]], [[8rug]] - ReASP (mutant)


*ASP II complex
*ASP II complex


**[[3eca]], [[4eca]], [[1nns]] – EcASP + AA<BR />  
**[[3eca]], [[4eca]], [[1nns]], [[6pab]], [[6pac]], [[6uog]], [[6uoh]], [[6v5f]], [[7m11]] – EcASP + AA<BR />  
**[[1ho3]] - EcASP (mutant) + AA<BR />
**[[1ho3]], [[2v2g]], [[6pa2]], [[6pa4]], [[6paa]], [[6v24]], [[6v25]], [[6v26]], [[6v27]], [[6v28]], [[6v29]], [[6v2c]], [[6v2g]], [[7r5q]], [[8ecd]], [[8ece]]  - EcASP (mutant) + AA<BR />
**[[6nx6]], [[6nx7]], [[6nx8]], [[6nx9]], [[6nxa]] - EcASP (mutant) + citrate<br />
**[[6pa3]], [[6pa5]], [[6pa6]], [[6pa8]], [[6pa9]], [[6v2a]], [[6v2b]] - EcASP (mutant) + Asn<br />
 
*ASP III
 
**[[4o48]] -gpASP + Asp<br />


*Isoaspartyl peptidase/L-asparaginase
*Isoaspartyl peptidase/L-asparaginase
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**[[4o0h]] - hIPA + L-Asp<br />
**[[4o0h]] - hIPA + L-Asp<br />
**[[4osx]], [[4osy]] - hIPA + Gly<br />
**[[4osx]], [[4osy]] - hIPA + Gly<br />
**[[8dqm]] - IPA – ''Roseivivax halodurans''<br />


*Glycosylasparaginase or N(4)-(β-N-acetylglucosaminyl)-L-asparaginase
*Glycosylasparaginase or N(4)-(β-N-acetylglucosaminyl)-L-asparaginase


**[[9gaa]] - EmGASP – Elizabethkingia meningoseptica<br />
**[[9gaa]] - EmGASP – ''Elizabethkingia meningoseptica''<br />
**[[9gac]], [[9gaf]], [[5v2i]], [[3ljq]] - EmGASP (mutant) <br />
**[[9gac]], [[9gaf]], [[5v2i]], [[3ljq]], [[6dey]] - EmGASP (mutant) <br />
**[[2gl9]], [[4r4y]] - EmGASP (mutant) + Asn<br />
**[[2gl9]], [[4r4y]] - EmGASP (mutant) + Asn<br />


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**[[2zak]], [[3c17]] - EcASP precursor (mutant)
**[[2zak]], [[3c17]] - EcASP precursor (mutant)
}}
}}
[[Category: Topic Page]]

Latest revision as of 13:51, 12 November 2024

3D structures of Asparaginase3D structures of Asparaginase

Updated on 12-November-2024

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Michal Harel
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