6ndd: Difference between revisions

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

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-'''Unreleased structure'''
-The entry 6ndd is ON HOLD
+==RHODOCETIN IN COMPLEX WITH THE INTEGRIN ALPHA2-A DOMAIN WITH MANGANESE BOUND==
+<StructureSection load='6ndd' size='340' side='right'caption='[[6ndd]], [[Resolution|resolution]] 3.05&Aring;' scene=''>
+== Structural highlights ==
+<table><tr><td colspan='2'>[[6ndd]] is a 18 chain structure with sequence from [https://en.wikipedia.org/wiki/Calloselasma_rhodostoma Calloselasma rhodostoma] and [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6NDD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6NDD FirstGlance]. <br>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.05&#8491;</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=NH4:AMMONIUM+ION'>NH4</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6ndd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6ndd OCA], [https://pdbe.org/6ndd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6ndd RCSB], [https://www.ebi.ac.uk/pdbsum/6ndd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6ndd ProSAT]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/ITA2_HUMAN ITA2_HUMAN] Integrin alpha-2/beta-1 is a receptor for laminin, collagen, collagen C-propeptides, fibronectin and E-cadherin. It recognizes the proline-hydroxylated sequence G-F-P-G-E-R in collagen. It is responsible for adhesion of platelets and other cells to collagens, modulation of collagen and collagenase gene expression, force generation and organization of newly synthesized extracellular matrix.
-Authors: Stetefeld, J., McDougall, M.D., Loewen, P.C.
+==See Also==
+*[[Integrin 3D structures|Integrin 3D structures]]
-Description: RHODOCETIN IN COMPLEX WITH THE INTEGRIN ALPHA2-A DOMAIN WITH MANGANESE BOUND
+*[[Rhodocetin|Rhodocetin]]
-[[Category: Unreleased Structures]]
+__TOC__
-[[Category: Stetefeld, J]]
+</StructureSection>
-[[Category: Loewen, P.C]]
+[[Category: Calloselasma rhodostoma]]
-[[Category: Mcdougall, M.D]]
+[[Category: Homo sapiens]]
+[[Category: Large Structures]]
+[[Category: Loewen PC]]
+[[Category: McDougall MD]]
+[[Category: Stetefeld J]]