6mmp: Difference between revisions

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 ==Diheteromeric NMDA receptor GluN1/GluN2A in the '2-Knuckle-Symmetric' conformation, in complex with glycine and glutamate, in the presence of 0.1 millimolar EDTA, and at pH 8.0==
-<StructureSection load='6mmp' size='340' side='right'caption='[[6mmp]], [[Resolution|resolution]] 6.88&Aring;' scene=''>
+<SX load='6mmp' size='340' side='right' viewer='molstar' caption='[[6mmp]], [[Resolution|resolution]] 6.88&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[6mmp]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Buffalo_rat Buffalo rat]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6MMP OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6MMP FirstGlance]. <br>
+<table><tr><td colspan='2'>[[6mmp]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Rattus_norvegicus Rattus norvegicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6MMP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6MMP FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 6.88&#8491;</td></tr>
-<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Grin1, Nmdar1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10116 Buffalo rat]), Grin2a ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10116 Buffalo rat])</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6mmp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6mmp OCA], [http://pdbe.org/6mmp PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6mmp RCSB], [http://www.ebi.ac.uk/pdbsum/6mmp PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6mmp ProSAT]</span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6mmp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6mmp OCA], [https://pdbe.org/6mmp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6mmp RCSB], [https://www.ebi.ac.uk/pdbsum/6mmp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6mmp ProSAT]</span></td></tr>
 </table>
-== Function ==
-[[http://www.uniprot.org/uniprot/NMDZ1_RAT NMDZ1_RAT]] NMDA receptor subtype of glutamate-gated ion channels possesses high calcium permeability and voltage-dependent sensitivity to magnesium. Mediated by glycine. Plays a key role in synaptic plasticity, synaptogenesis, excitotoxicity, memory acquisition and learning. It mediates neuronal functions in glutamate neurotransmission. Is involved in the cell surface targeting of NMDA receptors.<ref>PMID:15996549</ref>  [[http://www.uniprot.org/uniprot/NMDE1_RAT NMDE1_RAT]] NMDA receptor subtype of glutamate-gated ion channels possesses high calcium permeability and voltage-dependent sensitivity to magnesium. Activation requires binding of agonist to both types of subunits.
 <div style="background-color:#fffaf0;">
 == Publication Abstract from PubMed ==
@@ Line 25: / Line 23: @@
 <references/>
 __TOC__
-</StructureSection>
+</SX>
-[[Category: Buffalo rat]]
 [[Category: Large Structures]]
-[[Category: Chowdhury, S]]
+[[Category: Rattus norvegicus]]
-[[Category: Gouaux, E]]
+[[Category: Chowdhury S]]
-[[Category: Jalali-Yazdi, F]]
+[[Category: Gouaux E]]
-[[Category: Yoshioka, C]]
+[[Category: Jalali-Yazdi F]]
-[[Category: Ionotropic glutamate receptor]]
+[[Category: Yoshioka C]]
-[[Category: Ligand-gated ion channel]]
-[[Category: Membrane protein]]
-[[Category: Nmda receptor]]
-[[Category: Transport protein]]