4zn8: Difference between revisions

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OCA

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 ==Using molecular dynamics simulations to predict domain swapping of computationally designed protein variants==
-<StructureSection load='4zn8' size='340' side='right' caption='[[4zn8]], [[Resolution|resolution]] 3.00&Aring;' scene=''>
+<StructureSection load='4zn8' size='340' side='right'caption='[[4zn8]], [[Resolution|resolution]] 3.00&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[4zn8]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4ZN8 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4ZN8 FirstGlance]. <br>
+<table><tr><td colspan='2'>[[4zn8]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Drosophila_melanogaster Drosophila melanogaster]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4ZN8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4ZN8 FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=K:POTASSIUM+ION'>K</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3&#8491;</td></tr>
-<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4ndj|4ndj]], [[4ndk|4ndk]]</td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4zn8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4zn8 OCA], [https://pdbe.org/4zn8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4zn8 RCSB], [https://www.ebi.ac.uk/pdbsum/4zn8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4zn8 ProSAT]</span></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4zn8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4zn8 OCA], [http://pdbe.org/4zn8 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4zn8 RCSB], [http://www.ebi.ac.uk/pdbsum/4zn8 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4zn8 ProSAT]</span></td></tr>
 </table>
 <div style="background-color:#fffaf0;">
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 __TOC__
 </StructureSection>
-[[Category: Huang, P S]]
+[[Category: Drosophila melanogaster]]
-[[Category: Mayo, S L]]
+[[Category: Large Structures]]
-[[Category: Thomas, L M]]
+[[Category: Huang P-S]]
-[[Category: Computational protein design]]
+[[Category: Mayo SL]]
-[[Category: De novo protein]]
+[[Category: Thomas LM]]
-[[Category: Domain-swapped dimer]]