4rqw: Difference between revisions

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 ==Crystal structure of Myc3 N-terminal JAZ-binding domain [44-238] from Arabidopsis==
-<StructureSection load='4rqw' size='340' side='right' caption='[[4rqw]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
+<StructureSection load='4rqw' size='340' side='right'caption='[[4rqw]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[4rqw]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4RQW OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4RQW FirstGlance]. <br>
+<table><tr><td colspan='2'>[[4rqw]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4RQW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4RQW FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
-<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4rru|4rru]]</td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4rqw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4rqw OCA], [https://pdbe.org/4rqw PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4rqw RCSB], [https://www.ebi.ac.uk/pdbsum/4rqw PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4rqw ProSAT]</span></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4rqw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4rqw OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4rqw RCSB], [http://www.ebi.ac.uk/pdbsum/4rqw PDBsum]</span></td></tr>
 </table>
 == Function ==
-[[http://www.uniprot.org/uniprot/MYC3_ARATH MYC3_ARATH]] Transcription factor involved in tryptophan, jasmonic acid (JA) and other stress-responsive gene regulation. With MYC2 and MYC4, controls additively subsets of JA-dependent responses. Can form complexes with all known glucosinolate-related MYBs to regulate glucosinolate biosynthesis. Binds to the G-box (5'-CACGTG-3') of promoters. Activates multiple TIFY/JAZ promoters.<ref>PMID:12136026</ref> <ref>PMID:21242320</ref> <ref>PMID:21321051</ref> <ref>PMID:21335373</ref> <ref>PMID:23943862</ref>
+[https://www.uniprot.org/uniprot/MYC3_ARATH MYC3_ARATH] Transcription factor involved in tryptophan, jasmonic acid (JA) and other stress-responsive gene regulation. With MYC2 and MYC4, controls additively subsets of JA-dependent responses. Can form complexes with all known glucosinolate-related MYBs to regulate glucosinolate biosynthesis. Binds to the G-box (5'-CACGTG-3') of promoters. Activates multiple TIFY/JAZ promoters.<ref>PMID:12136026</ref> <ref>PMID:21242320</ref> <ref>PMID:21321051</ref> <ref>PMID:21335373</ref> <ref>PMID:23943862</ref>
 <div style="background-color:#fffaf0;">
 == Publication Abstract from PubMed ==
@@ Line 18: / Line 18: @@
 From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 </div>
+<div class="pdbe-citations 4rqw" style="background-color:#fffaf0;"></div>
 == References ==
 <references/>
 __TOC__
 </StructureSection>
-[[Category: Brunzelle, J]]
+[[Category: Arabidopsis thaliana]]
-[[Category: He, S Y]]
+[[Category: Large Structures]]
-[[Category: Ke, J]]
+[[Category: Brunzelle J]]
-[[Category: Melcher, K]]
+[[Category: He SY]]
-[[Category: Xu, H E]]
+[[Category: Ke J]]
-[[Category: Zhang, F]]
+[[Category: Melcher K]]
-[[Category: Zhou, M]]
+[[Category: Xu HE]]
-[[Category: Zhou, X E]]
+[[Category: Zhang F]]
-[[Category: Helix-sheet-helix fold]]
+[[Category: Zhou M]]
-[[Category: Jaz repressor]]
+[[Category: Zhou XE]]
-[[Category: Nuclear]]
-[[Category: Transcription factor]]
-[[Category: Transcription regulator]]