4rn5: Difference between revisions

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'''Unreleased structure'''


The entry 4rn5 is ON HOLD
==B1 domain of human Neuropilin-1 with acetate ion in a ligand-binding site==
<StructureSection load='4rn5' size='340' side='right'caption='[[4rn5]], [[Resolution|resolution]] 1.73&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[4rn5]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4RN5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4RN5 FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.73&#8491;</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4rn5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4rn5 OCA], [https://pdbe.org/4rn5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4rn5 RCSB], [https://www.ebi.ac.uk/pdbsum/4rn5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4rn5 ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/NRP1_HUMAN NRP1_HUMAN] The membrane-bound isoform 1 is a receptor involved in the development of the cardiovascular system, in angiogenesis, in the formation of certain neuronal circuits and in organogenesis outside the nervous system. It mediates the chemorepulsant activity of semaphorins. It binds to semaphorin 3A, The PLGF-2 isoform of PGF, The VEGF-165 isoform of VEGF and VEGF-B. Coexpression with KDR results in increased VEGF-165 binding to KDR as well as increased chemotaxis. It may regulate VEGF-induced angiogenesis.  The soluble isoform 2 binds VEGF-165 and appears to inhibit its binding to cells. It may also induce apoptosis by sequestering VEGF-165. May bind as well various members of the semaphorin family. Its expression has an averse effect on blood vessel number and integrity.


Authors: Allerston, C.K, Yelland, T.S, Jarvis, A, Jenkins, K, Winfield, N, Cheng, L, Jia, H, Zachary, I, Selwood, D.L, Djordjevic, S
==See Also==
 
*[[Neuropilin|Neuropilin]]
Description: B1 domain of human Neuropilin-1 bound with small molecule EG00491
__TOC__
</StructureSection>
[[Category: Homo sapiens]]
[[Category: Large Structures]]
[[Category: Allerston CK]]
[[Category: Cheng L]]
[[Category: Djordjevic S]]
[[Category: Jarvis A]]
[[Category: Jenkins K]]
[[Category: Jia H]]
[[Category: Selwood DL]]
[[Category: Winfield N]]
[[Category: Yelland TS]]
[[Category: Zachary I]]

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