4ogq: Difference between revisions
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==Internal Lipid Architecture of the Hetero-Oligomeric Cytochrome b6f Complex== | ==Internal Lipid Architecture of the Hetero-Oligomeric Cytochrome b6f Complex== | ||
<StructureSection load='4ogq' size='340' side='right' caption='[[4ogq]], [[Resolution|resolution]] 2.50Å' scene=''> | <StructureSection load='4ogq' size='340' side='right'caption='[[4ogq]], [[Resolution|resolution]] 2.50Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[4ogq]] is a 8 chain structure with sequence from [ | <table><tr><td colspan='2'>[[4ogq]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Nostoc_sp._PCC_7120_=_FACHB-418 Nostoc sp. PCC 7120 = FACHB-418]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4OGQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4OGQ FirstGlance]. <br> | ||
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=1O2:(2S)-3-(ALPHA-D-GALACTOPYRANOSYLOXY)-2-(HEXADECANOYLOXY)PROPYL+(9Z)-OCTADEC-9-ENOATE'>1O2</scene>, <scene name='pdbligand=2WA:(1S,8E)-1-{[(2S)-1-HYDROXY-3-{[(1S)-1-HYDROXYPENTADECYL]OXY}PROPAN-2-YL]OXY}HEPTADEC-8-EN-1-OL'>2WA</scene>, <scene name='pdbligand=2WD:(1R)-1-{[(2S)-3-HYDROXY-2-{[(1R)-1-HYDROXYPENTYL]OXY}PROPYL]OXY}HEXAN-1-OL'>2WD</scene>, <scene name='pdbligand=2WM:(1S,8E)-1-{[(2S)-3-HYDROXY-2-{[(1S)-1-HYDROXYOCTADECYL]OXY}PROPYL]OXY}OCTADEC-8-EN-1-OL'>2WM</scene>, <scene name='pdbligand=3WM:(1S,8E,1R,8Z)-1,1-{[(2S)-3-HYDROXYPROPANE-1,2-DIYL]BIS(OXY)}BISOCTADEC-8-EN-1-OL'>3WM</scene>, <scene name='pdbligand=7PH:(1R)-2-(DODECANOYLOXY)-1-[(PHOSPHONOOXY)METHYL]ETHYL+TETRADECANOATE'>7PH</scene>, <scene name='pdbligand=8K6:OCTADECANE'>8K6</scene>, <scene name='pdbligand=BCR:BETA-CAROTENE'>BCR</scene>, <scene name='pdbligand=CD:CADMIUM+ION'>CD</scene>, <scene name='pdbligand=CLA:CHLOROPHYLL+A'>CLA</scene>, <scene name='pdbligand=FES:FE2/S2+(INORGANIC)+CLUSTER'>FES</scene>, <scene name='pdbligand= | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.501Å</td></tr> | ||
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=1O2:(2S)-3-(ALPHA-D-GALACTOPYRANOSYLOXY)-2-(HEXADECANOYLOXY)PROPYL+(9Z)-OCTADEC-9-ENOATE'>1O2</scene>, <scene name='pdbligand=2WA:(1S,8E)-1-{[(2S)-1-HYDROXY-3-{[(1S)-1-HYDROXYPENTADECYL]OXY}PROPAN-2-YL]OXY}HEPTADEC-8-EN-1-OL'>2WA</scene>, <scene name='pdbligand=2WD:(1R)-1-{[(2S)-3-HYDROXY-2-{[(1R)-1-HYDROXYPENTYL]OXY}PROPYL]OXY}HEXAN-1-OL'>2WD</scene>, <scene name='pdbligand=2WM:(1S,8E)-1-{[(2S)-3-HYDROXY-2-{[(1S)-1-HYDROXYOCTADECYL]OXY}PROPYL]OXY}OCTADEC-8-EN-1-OL'>2WM</scene>, <scene name='pdbligand=3WM:(1S,8E,1R,8Z)-1,1-{[(2S)-3-HYDROXYPROPANE-1,2-DIYL]BIS(OXY)}BISOCTADEC-8-EN-1-OL'>3WM</scene>, <scene name='pdbligand=7PH:(1R)-2-(DODECANOYLOXY)-1-[(PHOSPHONOOXY)METHYL]ETHYL+TETRADECANOATE'>7PH</scene>, <scene name='pdbligand=8K6:OCTADECANE'>8K6</scene>, <scene name='pdbligand=BCR:BETA-CAROTENE'>BCR</scene>, <scene name='pdbligand=CD:CADMIUM+ION'>CD</scene>, <scene name='pdbligand=CLA:CHLOROPHYLL+A'>CLA</scene>, <scene name='pdbligand=FES:FE2/S2+(INORGANIC)+CLUSTER'>FES</scene>, <scene name='pdbligand=HEC:HEME+C'>HEC</scene>, <scene name='pdbligand=MYS:PENTADECANE'>MYS</scene>, <scene name='pdbligand=OCT:N-OCTANE'>OCT</scene>, <scene name='pdbligand=OPC:(7R,17E)-4-HYDROXY-N,N,N,7-TETRAMETHYL-7-[(8E)-OCTADEC-8-ENOYLOXY]-10-OXO-3,5,9-TRIOXA-4-PHOSPHAHEPTACOS-17-EN-1-AMINIUM+4-OXIDE'>OPC</scene>, <scene name='pdbligand=SQD:1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL'>SQD</scene>, <scene name='pdbligand=UMQ:UNDECYL-MALTOSIDE'>UMQ</scene></td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4ogq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ogq OCA], [https://pdbe.org/4ogq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4ogq RCSB], [https://www.ebi.ac.uk/pdbsum/4ogq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4ogq ProSAT]</span></td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | |||
</table> | </table> | ||
== Function == | == Function == | ||
[ | [https://www.uniprot.org/uniprot/CYB6_NOSS1 CYB6_NOSS1] Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions (By similarity). | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
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</div> | </div> | ||
<div class="pdbe-citations 4ogq" style="background-color:#fffaf0;"></div> | <div class="pdbe-citations 4ogq" style="background-color:#fffaf0;"></div> | ||
==See Also== | |||
*[[Cytochrome b6|Cytochrome b6]] | |||
== References == | == References == | ||
<references/> | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: | [[Category: Large Structures]] | ||
[[Category: | [[Category: Nostoc sp. PCC 7120 = FACHB-418]] | ||
[[Category: Cramer | [[Category: Cramer WA]] | ||
[[Category: Hasan | [[Category: Hasan SS]] | ||