4ian: Difference between revisions

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-{{STRUCTURE_4ian|  PDB=4ian  |  SCENE=  }}
-===Crystal Structure of apo Human PRPF4B kinase domain===
-{{ABSTRACT_PUBMED_24003220}}
-==Function==
+==Crystal Structure of apo Human PRPF4B kinase domain==
-[[http://www.uniprot.org/uniprot/PRP4B_HUMAN PRP4B_HUMAN]] Has a role in pre-mRNA splicing. Phosphorylates SF2/ASF.
+<StructureSection load='4ian' size='340' side='right'caption='[[4ian]], [[Resolution|resolution]] 2.44&Aring;' scene=''>
+== Structural highlights ==
+<table><tr><td colspan='2'>[[4ian]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4IAN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4IAN FirstGlance]. <br>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.44&#8491;</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PTR:O-PHOSPHOTYROSINE'>PTR</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4ian FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ian OCA], [https://pdbe.org/4ian PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4ian RCSB], [https://www.ebi.ac.uk/pdbsum/4ian PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4ian ProSAT]</span></td></tr>
+</table>
+<div style="background-color:#fffaf0;">
+== Publication Abstract from PubMed ==
+PRP4 kinase is known for its roles in regulating pre-mRNA splicing and beyond. Therefore, a wider spectrum of PRP4 kinase substrates could be expected. The role of PRP4 kinase in cancer is also yet to be fully elucidated. Attaining specific and potent PRP4 inhibitors would greatly facilitate the study of PRP4 biological function and its validation as a credible cancer target. In this report, we verified the requirement of enzymatic activity of PRP4 in regulating cancer cell growth and identified an array of potential novel substrates through orthogonal proteomics approaches. The ensuing effort in structural biology unveiled for the first time unique features of PRP4 kinase domain and its potential mode of interaction with a low molecular weight inhibitor. These results provide new and important information for further exploration of PRP4 kinase function in cancer.
-==About this Structure==
+Evaluation of cancer dependence and druggability of PRP4 kinase using cellular, biochemical, and structural approaches.,Gao Q, Mechin I, Kothari N, Guo Z, Deng G, Haas K, McManus J, Hoffmann D, Wang A, Wiederschain D, Rocnik J, Czechtizky W, Chen X, McLean L, Arlt H, Harper D, Liu F, Majid T, Patel V, Lengauer C, Garcia-Echeverria C, Zhang B, Cheng H, Dorsch M, Huang SM J Biol Chem. 2013 Sep 3. PMID:24003220<ref>PMID:24003220</ref>
-[[4ian]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Streptomyces_aureorectus Streptomyces aureorectus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4IAN OCA].
-==Reference==
+From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-<ref group="xtra">PMID:024003220</ref><references group="xtra"/><references/>
+</div>
-[[Category: Non-specific serine/threonine protein kinase]]
+<div class="pdbe-citations 4ian" style="background-color:#fffaf0;"></div>
-[[Category: Streptomyces aureorectus]]
+== References ==
-[[Category: Chen, X.]]
+<references/>
-[[Category: Haas, K.]]
+__TOC__
-[[Category: McLean, L.]]
+</StructureSection>
-[[Category: Mechin, I.]]
+[[Category: Homo sapiens]]
-[[Category: Zhang, Y.]]
+[[Category: Large Structures]]
-[[Category: Kinase]]
+[[Category: Chen X]]
-[[Category: Transferase]]
+[[Category: Haas K]]
+[[Category: McLean L]]
+[[Category: Mechin I]]
+[[Category: Zhang Y]]