4f2m: Difference between revisions

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 ==Crystal structure of a TGEV coronavirus Spike fragment in complex with the TGEV neutralizing monoclonal antibody 1AF10==
-<StructureSection load='4f2m' size='340' side='right' caption='[[4f2m]], [[Resolution|resolution]] 3.00&Aring;' scene=''>
+<StructureSection load='4f2m' size='340' side='right'caption='[[4f2m]], [[Resolution|resolution]] 3.00&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[4f2m]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Lk3_transgenic_mice Lk3 transgenic mice] and [http://en.wikipedia.org/wiki/Tgev_virulent_purdue Tgev virulent purdue]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4F2M OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4F2M FirstGlance]. <br>
+<table><tr><td colspan='2'>[[4f2m]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus] and [https://en.wikipedia.org/wiki/TGEV_virulent_Purdue TGEV virulent Purdue]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4F2M OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4F2M FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACY:ACETIC+ACID'>ACY</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3&#8491;</td></tr>
-<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4f5c|4f5c]]</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACY:ACETIC+ACID'>ACY</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
-<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">S ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=398812 TGEV virulent Purdue])</td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4f2m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4f2m OCA], [https://pdbe.org/4f2m PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4f2m RCSB], [https://www.ebi.ac.uk/pdbsum/4f2m PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4f2m ProSAT]</span></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4f2m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4f2m OCA], [http://pdbe.org/4f2m PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4f2m RCSB], [http://www.ebi.ac.uk/pdbsum/4f2m PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4f2m ProSAT]</span></td></tr>
 </table>
+== Function ==
+[https://www.uniprot.org/uniprot/Q0PKZ5_CVPPU Q0PKZ5_CVPPU]
 <div style="background-color:#fffaf0;">
 == Publication Abstract from PubMed ==
@@ Line 20: / Line 21: @@
 ==See Also==
-*[[3D structures of monoclonal antibody|3D structures of monoclonal antibody]]
+*[[Monoclonal Antibodies 3D structures|Monoclonal Antibodies 3D structures]]
+*[[Spike protein 3D structures|Spike protein 3D structures]]
 == References ==
 <references/>
 __TOC__
 </StructureSection>
-[[Category: Lk3 transgenic mice]]
+[[Category: Large Structures]]
-[[Category: Tgev virulent purdue]]
+[[Category: Mus musculus]]
-[[Category: Casasnovas, J M]]
+[[Category: TGEV virulent Purdue]]
-[[Category: Enjuanes, L]]
+[[Category: Casasnovas JM]]
-[[Category: Mudgal, G]]
+[[Category: Enjuanes L]]
-[[Category: Ordono, D]]
+[[Category: Mudgal G]]
-[[Category: Reguera, J]]
+[[Category: Ordono D]]
-[[Category: Santiago, C]]
+[[Category: Reguera J]]
-[[Category: Aminopeptidase n]]
+[[Category: Santiago C]]
-[[Category: Beta-barrel]]
-[[Category: Cellular receptor]]
-[[Category: Glycosylation]]
-[[Category: Immunoglobulin]]
-[[Category: Viral protein-immune system complex]]
-[[Category: Virus entry]]
-[[Category: Virus membrane]]
-[[Category: Virus neutralization]]