4etp: Difference between revisions

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 ==C-terminal motor and motor homology domain of Kar3Vik1 fused to a synthetic heterodimeric coiled coil==
-<StructureSection load='4etp' size='340' side='right' caption='[[4etp]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
+<StructureSection load='4etp' size='340' side='right'caption='[[4etp]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[4etp]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Baker's_yeast Baker's yeast]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4ETP OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4ETP FirstGlance]. <br>
+<table><tr><td colspan='2'>[[4etp]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae_S288C Saccharomyces cerevisiae S288C]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4ETP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4ETP FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=EBC:N,N-ETHANE-1,2-DIYLBIS(2-IODOACETAMIDE)'>EBC</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
-<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3kar|3kar]], [[2o0a|2o0a]], [[1n6m|1n6m]], [[1u0i|1u0i]], [[1f9t|1f9t]], [[1f9u|1f9u]], [[1f9v|1f9v]], [[1f9w|1f9w]]</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=EBC:N,N-ETHANE-1,2-DIYLBIS(2-IODOACETAMIDE)'>EBC</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">KAR3, kar3p, P9659.16, YPR141C ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=559292 Baker's yeast]), VIK1, Vik1p, YPL253C ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=559292 Baker's yeast])</td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4etp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4etp OCA], [https://pdbe.org/4etp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4etp RCSB], [https://www.ebi.ac.uk/pdbsum/4etp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4etp ProSAT]</span></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4etp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4etp OCA], [http://pdbe.org/4etp PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4etp RCSB], [http://www.ebi.ac.uk/pdbsum/4etp PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4etp ProSAT]</span></td></tr>
 </table>
 == Function ==
-[[http://www.uniprot.org/uniprot/KAR3_YEAST KAR3_YEAST]] Essential for yeast nuclear fusion during mating. KAR3 is a bifunctional protein having a kinesin-like motor domain joined to a distinct microtubule binding domain. It may mediate microtubule sliding during nuclear fusion and possibly mitosis. May interact with spindle microtubules to produce an inwardly directed force acting upon the poles. KAR3 function antagonizes CIP8 and KIP1 outward force action. KAR3 motor activity is directed toward the microtubule's minus end.<ref>PMID:2138512</ref> <ref>PMID:11729143</ref>  [[http://www.uniprot.org/uniprot/VIK1_YEAST VIK1_YEAST]] Targets and/or maintains KAR3 at the spindle pole body during vegetative growth.<ref>PMID:10087265</ref> <ref>PMID:11729143</ref>
+[https://www.uniprot.org/uniprot/KAR3_YEAST KAR3_YEAST] Essential for yeast nuclear fusion during mating. KAR3 is a bifunctional protein having a kinesin-like motor domain joined to a distinct microtubule binding domain. It may mediate microtubule sliding during nuclear fusion and possibly mitosis. May interact with spindle microtubules to produce an inwardly directed force acting upon the poles. KAR3 function antagonizes CIP8 and KIP1 outward force action. KAR3 motor activity is directed toward the microtubule's minus end.<ref>PMID:2138512</ref> <ref>PMID:11729143</ref>
 <div style="background-color:#fffaf0;">
 == Publication Abstract from PubMed ==
@@ Line 20: / Line 19: @@
 </div>
 <div class="pdbe-citations 4etp" style="background-color:#fffaf0;"></div>
+==See Also==
+*[[Kinesin 3D Structures|Kinesin 3D Structures]]
 == References ==
 <references/>
 __TOC__
 </StructureSection>
-[[Category: Baker's yeast]]
+[[Category: Large Structures]]
-[[Category: Chen, C J]]
+[[Category: Saccharomyces cerevisiae S288C]]
-[[Category: Cope, J]]
+[[Category: Chen CJ]]
-[[Category: Gilbert, S P]]
+[[Category: Cope J]]
-[[Category: Hoenger, A]]
+[[Category: Gilbert SP]]
-[[Category: Porche, K]]
+[[Category: Hoenger A]]
-[[Category: Rank, K C]]
+[[Category: Porche K]]
-[[Category: Rayment, I]]
+[[Category: Rank KC]]
-[[Category: Internal vik1 crosslink with n]]
+[[Category: Rayment I]]
-[[Category: Karyogamy]]
-[[Category: Kinesin motor homology domain]]
-[[Category: Kinesin motor protein]]
-[[Category: Microtubule]]
-[[Category: Mitosis]]
-[[Category: Motor protein]]
-[[Category: Nucleus]]