4eo1: Difference between revisions

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 ==crystal structure of the TolA binding domain from the filamentous phage IKe==
-<StructureSection load='4eo1' size='340' side='right' caption='[[4eo1]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
+<StructureSection load='4eo1' size='340' side='right'caption='[[4eo1]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[4eo1]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bpike Bpike]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4EO1 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4EO1 FirstGlance]. <br>
+<table><tr><td colspan='2'>[[4eo1]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Salmonella_phage_IKe Salmonella phage IKe]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4EO1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4EO1 FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
-<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3dgs|3dgs]], [[1g3p|1g3p]], [[1tol|1tol]], [[3knq|3knq]], [[2x9a|2x9a]], [[2x9b|2x9b]], [[1fgp|1fgp]], [[4eo0|4eo0]]</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">III ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10867 BPIKE])</td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4eo1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4eo1 OCA], [https://pdbe.org/4eo1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4eo1 RCSB], [https://www.ebi.ac.uk/pdbsum/4eo1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4eo1 ProSAT]</span></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4eo1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4eo1 OCA], [http://pdbe.org/4eo1 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4eo1 RCSB], [http://www.ebi.ac.uk/pdbsum/4eo1 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4eo1 ProSAT]</span></td></tr>
 </table>
 == Function ==
-[[http://www.uniprot.org/uniprot/G3P_BPIKE G3P_BPIKE]] Plays essential roles both in the penetration of the viral genome into the bacterial host via pilus retraction and in the extrusion process. During the initial step of infection, G3P mediates adsorption of the phage to its primary receptor, the tip of host F-pilus. Subsequent interaction with the host entry receptor tolA induces penetration of the viral DNA into the host cytoplasm. In the extrusion process, G3P mediates the release of the membrane-anchored virion from the cell via its C-terminal domain (By similarity).
+[https://www.uniprot.org/uniprot/G3P_BPIKE G3P_BPIKE] Plays essential roles both in the penetration of the viral genome into the bacterial host via pilus retraction and in the extrusion process. During the initial step of infection, G3P mediates adsorption of the phage to its primary receptor, the tip of host F-pilus. Subsequent interaction with the host entry receptor tolA induces penetration of the viral DNA into the host cytoplasm. In the extrusion process, G3P mediates the release of the membrane-anchored virion from the cell via its C-terminal domain (By similarity).
 <div style="background-color:#fffaf0;">
 == Publication Abstract from PubMed ==
@@ Line 20: / Line 19: @@
 </div>
 <div class="pdbe-citations 4eo1" style="background-color:#fffaf0;"></div>
+==See Also==
+*[[G3p|G3p]]
 == References ==
 <references/>
 __TOC__
 </StructureSection>
-[[Category: Bpike]]
+[[Category: Large Structures]]
-[[Category: Balbach, J]]
+[[Category: Salmonella phage IKe]]
-[[Category: Dobbek, H]]
+[[Category: Balbach J]]
-[[Category: Geitner, A J]]
+[[Category: Dobbek H]]
-[[Category: Jakob, R P]]
+[[Category: Geitner AJ]]
-[[Category: Schmid, F X]]
+[[Category: Jakob RP]]
-[[Category: Weininger, U]]
+[[Category: Schmid FX]]
-[[Category: Attachment protein]]
+[[Category: Weininger U]]
-[[Category: Coat protein]]
-[[Category: Filamentous phage]]
-[[Category: G3p]]
-[[Category: Infection]]
-[[Category: Phage coat]]
-[[Category: Phage envelope of the filamentous phage ike]]
-[[Category: Tola]]
-[[Category: Tola binding]]
-[[Category: Tola binding protein]]
-[[Category: Viral protein]]