3rlm: Difference between revisions

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-[[Image:3rlm.png|left|200px]]
-{{STRUCTURE_3rlm|  PDB=3rlm  |  SCENE=  }}
+==Structure of the W199F MauG/pre-Methylamine Dehydrogenase complex after treatment with hydrogen peroxide==
+<StructureSection load='3rlm' size='340' side='right'caption='[[3rlm]], [[Resolution|resolution]] 2.13&Aring;' scene=''>
+== Structural highlights ==
+<table><tr><td colspan='2'>[[3rlm]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Paracoccus_denitrificans_PD1222 Paracoccus denitrificans PD1222]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3RLM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3RLM FirstGlance]. <br>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.13&#8491;</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=0AF:7-HYDROXY-L-TRYPTOPHAN'>0AF</scene>, <scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=HEC:HEME+C'>HEC</scene>, <scene name='pdbligand=PGE:TRIETHYLENE+GLYCOL'>PGE</scene></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3rlm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3rlm OCA], [https://pdbe.org/3rlm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3rlm RCSB], [https://www.ebi.ac.uk/pdbsum/3rlm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3rlm ProSAT]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/MAUG_PARDP MAUG_PARDP] Involved in methylamine metabolism. Essential for the maturation of the beta subunit of MADH, presumably via a step in the biosynthesis of tryptophan tryptophylquinone (TTQ), the cofactor of MADH.
+<div style="background-color:#fffaf0;">
+== Publication Abstract from PubMed ==
+The diheme enzyme MauG catalyzes the posttranslational modification of the precursor protein of methylamine dehydrogenase (preMADH) to complete biosynthesis of its protein-derived tryptophan tryptophylquinone (TTQ) cofactor. Catalysis proceeds through a high valent bis-Fe(IV) redox state and requires long-range electron transfer (ET), as the distance between the modified residues of preMADH and the nearest heme iron of MauG is 19.4 A. Trp199 of MauG resides at the MauG-preMADH interface, positioned midway between the residues that are modified and the nearest heme. W199F and W199K mutations did not affect the spectroscopic and redox properties of MauG, or its ability to stabilize the bis-Fe(IV) state. Crystal structures of complexes of W199F/K MauG with preMADH showed no significant perturbation of the MauG-preMADH structure or protein interface. However, neither MauG variant was able to synthesize TTQ from preMADH. In contrast, an ET reaction from diferrous MauG to quinone MADH, which does not require the bis-Fe(IV) intermediate, was minimally affected by the W199F/K mutations. W199F/K MauGs were able to oxidize quinol MADH to form TTQ, the putative final two-electron oxidation of the biosynthetic process, but with k(cat)/K(m) values approximately 10% that of wild-type MauG. The differential effects of the W199F/K mutations on these three different reactions are explained by a critical role for Trp199 in mediating multistep hopping from preMADH to bis-Fe(IV) MauG during the long-range ET that is required for TTQ biosynthesis.
-===Structure of the W199F MauG/pre-Methylamine Dehydrogenase complex after treatment with hydrogen peroxide===
+Mutagenesis of tryptophan199 suggests that hopping is required for MauG-dependent tryptophan tryptophylquinone biosynthesis.,Tarboush NA, Jensen LM, Yukl ET, Geng J, Liu A, Wilmot CM, Davidson VL Proc Natl Acad Sci U S A. 2011 Oct 11;108(41):16956-61. Epub 2011 Oct 3. PMID:21969534<ref>PMID:21969534</ref>
-{{ABSTRACT_PUBMED_21969534}}
+From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
+</div>
-==About this Structure==
+<div class="pdbe-citations 3rlm" style="background-color:#fffaf0;"></div>
-[[3rlm]] is a 6 chain structure of [[Methylamine dehydrogenase]] with sequence from [http://en.wikipedia.org/wiki/Paracoccus_denitrificans Paracoccus denitrificans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3RLM OCA].
 ==See Also==
 *[[Methylamine dehydrogenase|Methylamine dehydrogenase]]
+*[[Methylamine utilisation protein|Methylamine utilisation protein]]
-==Reference==
+*[[Methylation utilization protein MauG|Methylation utilization protein MauG]]
-<ref group="xtra">PMID:021969534</ref><references group="xtra"/>
+== References ==
-[[Category: Amine dehydrogenase]]
+<references/>
-[[Category: Paracoccus denitrificans]]
+__TOC__
-[[Category: Wilmot, C M.]]
+</StructureSection>
-[[Category: Yukl, E T.]]
+[[Category: Large Structures]]
-[[Category: Electron transport]]
+[[Category: Paracoccus denitrificans PD1222]]
-[[Category: Oxidoreductase]]
+[[Category: Wilmot CM]]
+[[Category: Yukl ET]]