3oqb: Difference between revisions

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-{{STRUCTURE_3oqb|  PDB=3oqb  |  SCENE=  }}
-===CRYSTAL STRUCTURE OF putative oxidoreductase from Bradyrhizobium japonicum USDA 110===
-==About this Structure==
+==CRYSTAL STRUCTURE OF putative oxidoreductase from Bradyrhizobium japonicum USDA 110==
-[[3oqb]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Bradyrhizobium_japonicum Bradyrhizobium japonicum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3OQB OCA].
+<StructureSection load='3oqb' size='340' side='right'caption='[[3oqb]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
-[[Category: Bradyrhizobium japonicum]]
+== Structural highlights ==
-[[Category: Almo, S C.]]
+<table><tr><td colspan='2'>[[3oqb]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Bradyrhizobium_diazoefficiens_USDA_110 Bradyrhizobium diazoefficiens USDA 110]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3OQB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3OQB FirstGlance]. <br>
-[[Category: Burley, S K.]]
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.6&#8491;</td></tr>
-[[Category: Malashkevich, V N.]]
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics.]]
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3oqb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3oqb OCA], [https://pdbe.org/3oqb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3oqb RCSB], [https://www.ebi.ac.uk/pdbsum/3oqb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3oqb ProSAT]</span></td></tr>
-[[Category: Sauder, J M.]]
+</table>
-[[Category: Toro, R.]]
+== Function ==
-[[Category: Crystal structure]]
+[https://www.uniprot.org/uniprot/Q89RD2_BRADU Q89RD2_BRADU]
-[[Category: New york sgx research center for structural genomic]]
+== Evolutionary Conservation ==
-[[Category: New york structural genomix research consortium]]
+[[Image:Consurf_key_small.gif|200px|right]]
-[[Category: Nysgxrc]]
+Check<jmol>
-[[Category: Oxidoreductase]]
+  <jmolCheckbox>
-[[Category: Protein structure initiative]]
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/oq/3oqb_consurf.spt"</scriptWhenChecked>
-[[Category: Psi-2]]
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-[[Category: Structural genomic]]
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3oqb ConSurf].
+<div style="clear:both"></div>
+__TOC__
+</StructureSection>
+[[Category: Bradyrhizobium diazoefficiens USDA 110]]
+[[Category: Large Structures]]
+[[Category: Almo SC]]
+[[Category: Burley SK]]
+[[Category: Malashkevich VN]]
+[[Category: Sauder JM]]
+[[Category: Toro R]]