3oqb: Difference between revisions

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==CRYSTAL STRUCTURE OF putative oxidoreductase from Bradyrhizobium japonicum USDA 110==
The line below this paragraph, containing "STRUCTURE_3oqb", creates the "Structure Box" on the page.
<StructureSection load='3oqb' size='340' side='right'caption='[[3oqb]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3oqb]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Bradyrhizobium_diazoefficiens_USDA_110 Bradyrhizobium diazoefficiens USDA 110]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3OQB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3OQB FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.6&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
{{STRUCTURE_3oqb|  PDB=3oqb  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3oqb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3oqb OCA], [https://pdbe.org/3oqb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3oqb RCSB], [https://www.ebi.ac.uk/pdbsum/3oqb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3oqb ProSAT]</span></td></tr>
 
</table>
===CRYSTAL STRUCTURE OF putative oxidoreductase from Bradyrhizobium japonicum USDA 110===
== Function ==
 
[https://www.uniprot.org/uniprot/Q89RD2_BRADU Q89RD2_BRADU]  
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
3OQB is a 8 chains structure with sequences from [http://en.wikipedia.org/wiki/Bradyrhizobium_japonicum Bradyrhizobium japonicum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3OQB OCA].  
Check<jmol>
[[Category: Bradyrhizobium japonicum]]
  <jmolCheckbox>
[[Category: Almo, S C.]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/oq/3oqb_consurf.spt"</scriptWhenChecked>
[[Category: Burley, S K.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: Malashkevich, V N.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics.]]
  </jmolCheckbox>
[[Category: Sauder, J M.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3oqb ConSurf].
[[Category: Toro, R.]]
<div style="clear:both"></div>
[[Category: Crystal structure]]
__TOC__
[[Category: New york sgx research center for structural genomic]]
</StructureSection>
[[Category: New york structural genomix research consortium]]
[[Category: Bradyrhizobium diazoefficiens USDA 110]]
[[Category: Nysgxrc]]
[[Category: Large Structures]]
[[Category: Oxidoreductase]]
[[Category: Almo SC]]
[[Category: Protein structure initiative]]
[[Category: Burley SK]]
[[Category: Psi-2]]
[[Category: Malashkevich VN]]
[[Category: Structural genomic]]
[[Category: Sauder JM]]
 
[[Category: Toro R]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Sep 15 10:56:57 2010''

Latest revision as of 12:31, 30 October 2024

CRYSTAL STRUCTURE OF putative oxidoreductase from Bradyrhizobium japonicum USDA 110CRYSTAL STRUCTURE OF putative oxidoreductase from Bradyrhizobium japonicum USDA 110

Structural highlights

3oqb is a 8 chain structure with sequence from Bradyrhizobium diazoefficiens USDA 110. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.6Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

Q89RD2_BRADU

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

3oqb, resolution 2.60Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
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