3oop: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
No edit summary
No edit summary
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{STRUCTURE_3oop|  PDB=3oop  |  SCENE=  }}
===The structure of a protein with unknown function from Listeria innocua Clip11262===


==About this Structure==
==The structure of a protein with unknown function from Listeria innocua Clip11262==
[[3oop]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Listeria_innocua Listeria innocua]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3OOP OCA].  
<StructureSection load='3oop' size='340' side='right'caption='[[3oop]], [[Resolution|resolution]] 1.78&Aring;' scene=''>
[[Category: Listeria innocua]]
== Structural highlights ==
[[Category: Fan, Y.]]
<table><tr><td colspan='2'>[[3oop]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Listeria_innocua_Clip11262 Listeria innocua Clip11262]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3OOP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3OOP FirstGlance]. <br>
[[Category: Gu, M.]]
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.78&#8491;</td></tr>
[[Category: Joachimiak, A.]]
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
[[Category: Li, H.]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3oop FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3oop OCA], [https://pdbe.org/3oop PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3oop RCSB], [https://www.ebi.ac.uk/pdbsum/3oop PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3oop ProSAT]</span></td></tr>
[[Category: MCSG, Midwest Center for Structural Genomics.]]
</table>
[[Category: Zhou, Y.]]
== Function ==
[[Category: Mcsg]]
[https://www.uniprot.org/uniprot/Q926T1_LISIN Q926T1_LISIN]  
[[Category: Midwest center for structural genomic]]
== Evolutionary Conservation ==
[[Category: Protein structure initiative]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: Psi-2]]
Check<jmol>
[[Category: Structural genomic]]
  <jmolCheckbox>
[[Category: Unknown function]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/oo/3oop_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3oop ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Listeria innocua Clip11262]]
[[Category: Fan Y]]
[[Category: Gu M]]
[[Category: Joachimiak A]]
[[Category: Li H]]
[[Category: Zhou Y]]

Latest revision as of 09:36, 27 November 2024

The structure of a protein with unknown function from Listeria innocua Clip11262The structure of a protein with unknown function from Listeria innocua Clip11262

Structural highlights

3oop is a 1 chain structure with sequence from Listeria innocua Clip11262. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.78Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

Q926T1_LISIN

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

3oop, resolution 1.78Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA