3o6p: Difference between revisions

← Older edit

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

@@ Line 1: / Line 1: @@
-[[Image:3o6p.png|left|200px]]
-{{STRUCTURE_3o6p|  PDB=3o6p  |  SCENE=  }}
+==Crystal structure of peptide ABC transporter, peptide-binding protein==
+<StructureSection load='3o6p' size='340' side='right'caption='[[3o6p]], [[Resolution|resolution]] 1.65&Aring;' scene=''>
-===Crystal structure of peptide ABC transporter, peptide-binding protein===
+== Structural highlights ==
+<table><tr><td colspan='2'>[[3o6p]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Enterococcus_faecalis_V583 Enterococcus faecalis V583]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3O6P OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3O6P FirstGlance]. <br>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.65&#8491;</td></tr>
-==About this Structure==
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
-[[3o6p]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Enterococcus_faecalis Enterococcus faecalis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3O6P OCA].
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3o6p FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3o6p OCA], [https://pdbe.org/3o6p PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3o6p RCSB], [https://www.ebi.ac.uk/pdbsum/3o6p PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3o6p ProSAT]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/Q837D6_ENTFA Q837D6_ENTFA]
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/o6/3o6p_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3o6p ConSurf].
+<div style="clear:both"></div>
 ==See Also==
-*[[ABC transporter|ABC transporter]]
+*[[ABC transporter 3D structures|ABC transporter 3D structures]]
-[[Category: Enterococcus faecalis]]
+__TOC__
-[[Category: Bearden, J.]]
+</StructureSection>
-[[Category: Bigelow, L.]]
+[[Category: Enterococcus faecalis V583]]
-[[Category: Chang, C.]]
+[[Category: Large Structures]]
-[[Category: Joachimiak, A.]]
+[[Category: Bearden J]]
-[[Category: MCSG, Midwest Center for Structural Genomics.]]
+[[Category: Bigelow L]]
-[[Category: Abc transporter]]
+[[Category: Chang C]]
-[[Category: Mcsg]]
+[[Category: Joachimiak A]]
-[[Category: Midwest center for structural genomic]]
-[[Category: Protein binding]]
-[[Category: Protein structure initiative]]
-[[Category: Psi-2]]
-[[Category: Structural genomic]]