3nx4: Difference between revisions

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[[Image:3nx4.jpg|left|200px]]


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==Crystal structure of the yhdH oxidoreductase from Salmonella enterica in complex with NADP==
The line below this paragraph, containing "STRUCTURE_3nx4", creates the "Structure Box" on the page.
<StructureSection load='3nx4' size='340' side='right'caption='[[3nx4]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3nx4]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._LT2 Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NX4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3NX4 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=NAP:NADP+NICOTINAMIDE-ADENINE-DINUCLEOTIDE+PHOSPHATE'>NAP</scene></td></tr>
{{STRUCTURE_3nx4|  PDB=3nx4  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3nx4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3nx4 OCA], [https://pdbe.org/3nx4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3nx4 RCSB], [https://www.ebi.ac.uk/pdbsum/3nx4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3nx4 ProSAT]</span></td></tr>
 
</table>
===Crystal structure of the yhdH oxidoreductase from Salmonella enterica in complex with NADP===
== Function ==
 
[https://www.uniprot.org/uniprot/Q7CPM2_SALTY Q7CPM2_SALTY]  
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
3NX4 is a 2 chains structure with sequences from [http://en.wikipedia.org/wiki/Salmonella_enterica_subsp._enterica_serovar_typhimurium Salmonella enterica subsp. enterica serovar typhimurium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NX4 OCA].  
Check<jmol>
[[Category: Salmonella enterica subsp. enterica serovar typhimurium]]
  <jmolCheckbox>
[[Category: Anderson, S M.]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/nx/3nx4_consurf.spt"</scriptWhenChecked>
[[Category: Anderson, W F.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: CSGID, Center for Structural Genomics of Infectious Diseases.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Onopriyenko, O.]]
  </jmolCheckbox>
[[Category: Peterson, S.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3nx4 ConSurf].
[[Category: Savchenko, A.]]
<div style="clear:both"></div>
[[Category: Skarina, T.]]
__TOC__
[[Category: Wawrzak, Z.]]
</StructureSection>
[[Category: Center for structural genomics of infectious disease]]
[[Category: Large Structures]]
[[Category: Csgid]]
[[Category: Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]]
[[Category: Oxidoreductase]]
[[Category: Anderson SM]]
[[Category: Protein structure initiative]]
[[Category: Anderson WF]]
[[Category: Psi]]
[[Category: Onopriyenko O]]
[[Category: Structural genomic]]
[[Category: Peterson S]]
 
[[Category: Savchenko A]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Aug  4 09:13:59 2010''
[[Category: Skarina T]]
[[Category: Wawrzak Z]]

Latest revision as of 13:14, 6 November 2024

Crystal structure of the yhdH oxidoreductase from Salmonella enterica in complex with NADPCrystal structure of the yhdH oxidoreductase from Salmonella enterica in complex with NADP

Structural highlights

3nx4 is a 2 chain structure with sequence from Salmonella enterica subsp. enterica serovar Typhimurium str. LT2. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.9Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

Q7CPM2_SALTY

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

3nx4, resolution 1.90Å

Drag the structure with the mouse to rotate

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OCA
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