3nqb: Difference between revisions

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[[Image:3nqb.jpg|left|200px]]


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==Crystal Structure of Adenine Deaminase from Agrobacterium tumefaciens (str. C 58)==
The line below this paragraph, containing "STRUCTURE_3nqb", creates the "Structure Box" on the page.
<StructureSection load='3nqb' size='340' side='right'caption='[[3nqb]], [[Resolution|resolution]] 2.21&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)  
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3nqb]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Agrobacterium_fabrum_str._C58 Agrobacterium fabrum str. C58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NQB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3NQB FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.21&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
{{STRUCTURE_3nqb| PDB=3nqb |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3nqb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3nqb OCA], [https://pdbe.org/3nqb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3nqb RCSB], [https://www.ebi.ac.uk/pdbsum/3nqb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3nqb ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/ADEC2_AGRFC ADEC2_AGRFC]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/nq/3nqb_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3nqb ConSurf].
<div style="clear:both"></div>


===Crystal Structure of Adenine Deaminase from Agrobacterium tumefaciens (str. C 58)===
==See Also==
 
*[[Deaminase 3D structures|Deaminase 3D structures]]
 
*[[Histone 3D structures|Histone 3D structures]]
==About this Structure==
__TOC__
3NQB is a 2 chains structure with sequences from [http://en.wikipedia.org/wiki/Agrobacterium_tumefaciens Agrobacterium tumefaciens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NQB OCA].
</StructureSection>
[[Category: Adenine deaminase]]
[[Category: Agrobacterium fabrum str. C58]]
[[Category: Agrobacterium tumefaciens]]
[[Category: Large Structures]]
[[Category: Bagaria, A.]]
[[Category: Bagaria A]]
[[Category: Burley, S K.]]
[[Category: Burley SK]]
[[Category: Kumaran, D.]]
[[Category: Kumaran D]]
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics.]]
[[Category: Swaminathan S]]
[[Category: Swaminathan, S.]]
[[Category: Amidohydrolase]]
[[Category: Hydrolase]]
[[Category: New york sgx research center for structural genomic]]
[[Category: Nucleotide binding]]
[[Category: Nysgxrc]]
[[Category: Protein structure initiative]]
[[Category: Psi-ii]]
[[Category: Structural genomic]]
[[Category: Tim-barrel]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jul 28 12:43:34 2010''

Latest revision as of 05:11, 21 November 2024

Crystal Structure of Adenine Deaminase from Agrobacterium tumefaciens (str. C 58)Crystal Structure of Adenine Deaminase from Agrobacterium tumefaciens (str. C 58)

Structural highlights

3nqb is a 2 chain structure with sequence from Agrobacterium fabrum str. C58. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.21Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

ADEC2_AGRFC

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

3nqb, resolution 2.21Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
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