3nix: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
← Older edit
No edit summary
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{Seed}}
[[Image:3nix.jpg|left|200px]]


<!--
==Crystal structure of flavoprotein/dehydrogenase from Cytophaga hutchinsonii. Northeast Structural Genomics Consortium Target ChR43.==
The line below this paragraph, containing "STRUCTURE_3nix", creates the "Structure Box" on the page.
<StructureSection load='3nix' size='340' side='right'caption='[[3nix]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3nix]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Cytophaga_hutchinsonii_ATCC_33406 Cytophaga hutchinsonii ATCC 33406]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NIX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3NIX FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.6&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
{{STRUCTURE_3nix|  PDB=3nix  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3nix FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3nix OCA], [https://pdbe.org/3nix PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3nix RCSB], [https://www.ebi.ac.uk/pdbsum/3nix PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3nix ProSAT]</span></td></tr>
 
</table>
===Crystal structure of flavoprotein/dehydrogenase from Cytophaga hutchinsonii. Northeast Structural Genomics Consortium Target ChR43.===
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
 
Check<jmol>
==About this Structure==
  <jmolCheckbox>
3NIX is a 8 chains structure with sequences from [http://en.wikipedia.org/wiki/Cytophaga_hutchinsonii Cytophaga hutchinsonii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NIX OCA].  
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ni/3nix_consurf.spt"</scriptWhenChecked>
[[Category: Cytophaga hutchinsonii]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: Acton, T B.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Ciccosanti, C.]]
  </jmolCheckbox>
[[Category: Everett, J K.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3nix ConSurf].
[[Category: Foote, E L.]]
<div style="clear:both"></div>
[[Category: Hunt, J F.]]
__TOC__
[[Category: Maglaqui, M.]]
</StructureSection>
[[Category: Montelione, G T.]]
[[Category: Cytophaga hutchinsonii ATCC 33406]]
[[Category: NESG, Northeast Structural Genomics Consortium.]]
[[Category: Large Structures]]
[[Category: Nair, R.]]
[[Category: Acton TB]]
[[Category: Rost, B.]]
[[Category: Ciccosanti C]]
[[Category: Sahdev, S.]]
[[Category: Everett JK]]
[[Category: Seetharaman, J.]]
[[Category: Foote EL]]
[[Category: Su, M.]]
[[Category: Hunt JF]]
[[Category: Tong, L.]]
[[Category: Maglaqui M]]
[[Category: Vorobiev, S.]]
[[Category: Montelione GT]]
[[Category: Xiao, R.]]
[[Category: Nair R]]
[[Category: Dehydrogenase]]
[[Category: Rost B]]
[[Category: Flavoprotein]]
[[Category: Sahdev S]]
[[Category: Nesg]]
[[Category: Seetharaman J]]
[[Category: Northeast structural genomics consortium]]
[[Category: Su M]]
[[Category: Oxidoreductase]]
[[Category: Tong L]]
[[Category: Protein structure initiative]]
[[Category: Vorobiev S]]
[[Category: Psi-2]]
[[Category: Xiao R]]
[[Category: Structural genomic]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jun 30 13:52:03 2010''

Latest revision as of 09:32, 27 November 2024

Crystal structure of flavoprotein/dehydrogenase from Cytophaga hutchinsonii. Northeast Structural Genomics Consortium Target ChR43.Crystal structure of flavoprotein/dehydrogenase from Cytophaga hutchinsonii. Northeast Structural Genomics Consortium Target ChR43.

Structural highlights

3nix is a 8 chain structure with sequence from Cytophaga hutchinsonii ATCC 33406. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.6Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

3nix, resolution 2.60Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
Retrieved from "https://proteopedia.openfox.io/wiki/index.php?title=3nix&oldid=4210279"