3n2d: Difference between revisions

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{{STRUCTURE_3n2d|  PDB=3n2d  |  SCENE=  }}
===Crystal Structure of the Complex of type I Ribosome inactivating protein with hexapeptide Ser-Asp-Asp-Asp-Met-Gly at 2.2 A resolution===


==Function==
==Crystal Structure of the Complex of type I Ribosome inactivating protein with hexapeptide Ser-Asp-Asp-Asp-Met-Gly at 2.2 A resolution==
[[http://www.uniprot.org/uniprot/RLA4_YEAST RLA4_YEAST]] Plays an important role in the elongation step of protein synthesis.[HAMAP-Rule:MF_01478]  
<StructureSection load='3n2d' size='340' side='right'caption='[[3n2d]], [[Resolution|resolution]] 2.22&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[3n2d]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Momordica_balsamina Momordica balsamina] and [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3N2D OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3N2D FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.22&#8491;</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3n2d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3n2d OCA], [https://pdbe.org/3n2d PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3n2d RCSB], [https://www.ebi.ac.uk/pdbsum/3n2d PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3n2d ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/D9J2T9_MOMBA D9J2T9_MOMBA]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/n2/3n2d_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3n2d ConSurf].
<div style="clear:both"></div>


==About this Structure==
==See Also==
[[3n2d]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Momordica_balsamina Momordica balsamina]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3N2D OCA].
*[[Ribosome inactivating protein 3D structures|Ribosome inactivating protein 3D structures]]
*[[Stathmin-4 3D structures|Stathmin-4 3D structures]]
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Momordica balsamina]]
[[Category: Momordica balsamina]]
[[Category: RRNA N-glycosylase]]
[[Category: Saccharomyces cerevisiae]]
[[Category: Bhushan, A.]]
[[Category: Bhushan A]]
[[Category: Kaur, P.]]
[[Category: Kaur P]]
[[Category: Kumar, R Prem.]]
[[Category: Kushwaha GS]]
[[Category: Kushwaha, G S.]]
[[Category: Prem Kumar R]]
[[Category: Sharma, S.]]
[[Category: Sharma S]]
[[Category: Singh, T P.]]
[[Category: Singh TP]]
[[Category: Sinha, M.]]
[[Category: Sinha M]]
[[Category: Hexapeptide]]
[[Category: Hydrolase]]
[[Category: Plant protein]]
[[Category: Rip]]

Latest revision as of 13:12, 6 November 2024

Crystal Structure of the Complex of type I Ribosome inactivating protein with hexapeptide Ser-Asp-Asp-Asp-Met-Gly at 2.2 A resolutionCrystal Structure of the Complex of type I Ribosome inactivating protein with hexapeptide Ser-Asp-Asp-Asp-Met-Gly at 2.2 A resolution

Structural highlights

3n2d is a 2 chain structure with sequence from Momordica balsamina and Saccharomyces cerevisiae. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.22Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

D9J2T9_MOMBA

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

3n2d, resolution 2.22Å

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