3lyu: Difference between revisions

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-{{Seed}}
-[[Image:3lyu.jpg|left|200px]]
-<!--
+==Crystal Structure of the C-terminal domain (residues 83-215) of PF1911 hydrogenase from Pyrococcus furiosus, Northeast Structural Genomics Consortium Target PfR246A==
-The line below this paragraph, containing "STRUCTURE_3lyu", creates the "Structure Box" on the page.
+<StructureSection load='3lyu' size='340' side='right'caption='[[3lyu]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[3lyu]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_furiosus Pyrococcus furiosus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LYU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3LYU FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-{{STRUCTURE_3lyu|  PDB=3lyu  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3lyu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3lyu OCA], [https://pdbe.org/3lyu PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3lyu RCSB], [https://www.ebi.ac.uk/pdbsum/3lyu PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3lyu ProSAT]</span></td></tr>
+</table>
-===Crystal Structure of the C-terminal domain (residues 83-215) of PF1911 hydrogenase from Pyrococcus furiosus, Northeast Structural Genomics Consortium Target PfR246A===
+== Function ==
+[https://www.uniprot.org/uniprot/Q8TZS3_PYRFU Q8TZS3_PYRFU]
+== Evolutionary Conservation ==
-==About this Structure==
+[[Image:Consurf_key_small.gif|200px|right]]
-LYU is a 6 chains structure with sequences from [http://en.wikipedia.org/wiki/Pyrococcus_furiosus Pyrococcus furiosus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LYU OCA].
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ly/3lyu_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3lyu ConSurf].
+<div style="clear:both"></div>
+__TOC__
+</StructureSection>
+[[Category: Large Structures]]
 [[Category: Pyrococcus furiosus]]
-[[Category: Abashidze, M.]]
+[[Category: Abashidze M]]
-[[Category: Acton, T B.]]
+[[Category: Acton TB]]
-[[Category: Belote, R L.]]
+[[Category: Belote RL]]
-[[Category: Ciccosanti, C.]]
+[[Category: Ciccosanti C]]
-[[Category: Everett, J K.]]
+[[Category: Everett JK]]
-[[Category: Foote, E L.]]
+[[Category: Foote EL]]
-[[Category: Forouhar, F.]]
+[[Category: Forouhar F]]
-[[Category: Hunt, J F.]]
+[[Category: Hunt JF]]
-[[Category: Montelione, G T.]]
+[[Category: Montelione GT]]
-[[Category: NESG, Northeast Structural Genomics Consortium.]]
+[[Category: Nair R]]
-[[Category: Nair, R.]]
+[[Category: Rost B]]
-[[Category: Rost, B.]]
+[[Category: Sahdev S]]
-[[Category: Sahdev, S.]]
+[[Category: Seetharaman J]]
-[[Category: Seetharaman, J.]]
+[[Category: Tong L]]
-[[Category: Tong, L.]]
+[[Category: Xiao R]]
-[[Category: Xiao, R.]]
-[[Category: Nesg]]
-[[Category: Northeast structural genomics consortium]]
-[[Category: Oxidoreductase]]
-[[Category: Protein structure initiative]]
-[[Category: Psi-2]]
-[[Category: Structural genomic]]
-[[Category: The c-terminal has an alpha-beta fold]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Mar 24 09:07:57 2010''