3lys: Difference between revisions

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 ==Crystal Structure of the N-terminal domain of the Prophage pi2 protein 01 (integrase) from Lactococcus lactis, Northeast Structural Genomics Consortium Target KR124F==
-<StructureSection load='3lys' size='340' side='right' caption='[[3lys]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
+<StructureSection load='3lys' size='340' side='right'caption='[[3lys]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[3lys]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/"lactococcus_lactis_subsp._diacitilactis_(sic)"_(garvie_and_farrow_1982)_schleifer_et_al._1986 "lactococcus lactis subsp. diacitilactis (sic)" (garvie and farrow 1982) schleifer et al. 1986]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LYS OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3LYS FirstGlance]. <br>
+<table><tr><td colspan='2'>[[3lys]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Lactococcus_lactis_subsp._lactis Lactococcus lactis subsp. lactis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LYS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3LYS FirstGlance]. <br>
-</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.8&#8491;</td></tr>
-<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">int, L364, L36404, LL1008, pi201 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1360 "Lactococcus lactis subsp. diacitilactis (sic)" (Garvie and Farrow 1982) Schleifer et al. 1986])</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3lys FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3lys OCA], [http://pdbe.org/3lys PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3lys RCSB], [http://www.ebi.ac.uk/pdbsum/3lys PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3lys ProSAT]</span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3lys FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3lys OCA], [https://pdbe.org/3lys PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3lys RCSB], [https://www.ebi.ac.uk/pdbsum/3lys PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3lys ProSAT]</span></td></tr>
 </table>
+== Function ==
+[https://www.uniprot.org/uniprot/Q9CGT4_LACLA Q9CGT4_LACLA]
 == Evolutionary Conservation ==
 [[Image:Consurf_key_small.gif|200px|right]]
 Check<jmol>
    <jmolCheckbox>
-     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ly/3lys_consurf.spt"</scriptWhenChecked>
+     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ly/3lys_consurf.spt"</scriptWhenChecked>
-     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
      <text>to colour the structure by Evolutionary Conservation</text>
    </jmolCheckbox>
@@ Line 20: / Line 22: @@
 __TOC__
 </StructureSection>
-[[Category: Abashidze, M]]
+[[Category: Lactococcus lactis subsp. lactis]]
-[[Category: Acton, T B]]
+[[Category: Large Structures]]
-[[Category: Belote, R L]]
+[[Category: Abashidze M]]
-[[Category: Ciccosanti, C]]
+[[Category: Acton TB]]
-[[Category: Everett, J K]]
+[[Category: Belote RL]]
-[[Category: Forouhar, F]]
+[[Category: Ciccosanti C]]
-[[Category: Hunt, J F]]
+[[Category: Everett JK]]
-[[Category: Montelione, G T]]
+[[Category: Forouhar F]]
-[[Category: Structural genomic]]
+[[Category: Hunt JF]]
-[[Category: Nair, R]]
+[[Category: Montelione GT]]
-[[Category: Rost, B]]
+[[Category: Nair R]]
-[[Category: Sahdev, S]]
+[[Category: Rost B]]
-[[Category: Seetharaman, J]]
+[[Category: Sahdev S]]
-[[Category: Tong, L]]
+[[Category: Seetharaman J]]
-[[Category: Xiao, R]]
+[[Category: Tong L]]
-[[Category: Helical n-terminal domain]]
+[[Category: Xiao R]]
-[[Category: Nesg]]
-[[Category: PSI, Protein structure initiative]]
-[[Category: Recombination]]