3lmc: Difference between revisions

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==Crystal Structure of zinc-dependent peptidase from Methanocorpusculum labreanum (strain Z), Northeast Structural Genomics Consortium Target MuR16==
==Crystal Structure of zinc-dependent peptidase from Methanocorpusculum labreanum (strain Z), Northeast Structural Genomics Consortium Target MuR16==
<StructureSection load='3lmc' size='340' side='right' caption='[[3lmc]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
<StructureSection load='3lmc' size='340' side='right'caption='[[3lmc]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[3lmc]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Metlz Metlz]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LMC OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3LMC FirstGlance]. <br>
<table><tr><td colspan='2'>[[3lmc]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Methanocorpusculum_labreanum_Z Methanocorpusculum labreanum Z]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LMC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3LMC FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.997&#8491;</td></tr>
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Mlab_0438 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=410358 METLZ])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3lmc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3lmc OCA], [https://pdbe.org/3lmc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3lmc RCSB], [https://www.ebi.ac.uk/pdbsum/3lmc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3lmc ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3lmc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3lmc OCA], [http://pdbe.org/3lmc PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3lmc RCSB], [http://www.ebi.ac.uk/pdbsum/3lmc PDBsum]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/A2SQK8_METLZ A2SQK8_METLZ]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/lm/3lmc_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/lm/3lmc_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
   </jmolCheckbox>
   </jmolCheckbox>
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Metlz]]
[[Category: Large Structures]]
[[Category: Acton, T B]]
[[Category: Methanocorpusculum labreanum Z]]
[[Category: Ashok, S]]
[[Category: Acton TB]]
[[Category: Ciccosanti, C]]
[[Category: Ashok S]]
[[Category: Everett, J K]]
[[Category: Ciccosanti C]]
[[Category: Hunt, J F]]
[[Category: Everett JK]]
[[Category: Kuzin, A]]
[[Category: Hunt JF]]
[[Category: Lee, D]]
[[Category: Kuzin A]]
[[Category: Montelione, G T]]
[[Category: Lee D]]
[[Category: Structural genomic]]
[[Category: Montelione GT]]
[[Category: Nair, R]]
[[Category: Nair R]]
[[Category: Patel, P]]
[[Category: Patel P]]
[[Category: Rost, B]]
[[Category: Rost B]]
[[Category: Seetharaman, J]]
[[Category: Seetharaman J]]
[[Category: Tong, L]]
[[Category: Tong L]]
[[Category: Vorobiev, S]]
[[Category: Vorobiev S]]
[[Category: Xiao, R]]
[[Category: Xiao R]]
[[Category: A2sqk8]]
[[Category: Hydrolase]]
[[Category: Mur16]]
[[Category: Nesg]]
[[Category: PSI, Protein structure initiative]]

Latest revision as of 12:23, 30 October 2024

Crystal Structure of zinc-dependent peptidase from Methanocorpusculum labreanum (strain Z), Northeast Structural Genomics Consortium Target MuR16Crystal Structure of zinc-dependent peptidase from Methanocorpusculum labreanum (strain Z), Northeast Structural Genomics Consortium Target MuR16

Structural highlights

3lmc is a 1 chain structure with sequence from Methanocorpusculum labreanum Z. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.997Å
Ligands:, ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

A2SQK8_METLZ

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

3lmc, resolution 2.00Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA