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==Crystal structure of putative methyltransferase from Lactobacillus brevis== | ==Crystal structure of putative methyltransferase from Lactobacillus brevis== | ||
<StructureSection load='3kwp' size='340' side='right' caption='[[3kwp]], [[Resolution|resolution]] 2.29Å' scene=''> | <StructureSection load='3kwp' size='340' side='right'caption='[[3kwp]], [[Resolution|resolution]] 2.29Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[3kwp]] is a 1 chain structure with sequence from [ | <table><tr><td colspan='2'>[[3kwp]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Levilactobacillus_brevis_ATCC_367 Levilactobacillus brevis ATCC 367]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KWP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3KWP FirstGlance]. <br> | ||
</td></tr><tr id=' | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.29Å</td></tr> | ||
<tr id=' | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene></td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3kwp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3kwp OCA], [https://pdbe.org/3kwp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3kwp RCSB], [https://www.ebi.ac.uk/pdbsum/3kwp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3kwp ProSAT]</span></td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | |||
</table> | </table> | ||
== Function == | == Function == | ||
[ | [https://www.uniprot.org/uniprot/Q03SR9_LEVBA Q03SR9_LEVBA] Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.[HAMAP-Rule:MF_01877] | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/kw/3kwp_consurf.spt"</scriptWhenChecked> | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/kw/3kwp_consurf.spt"</scriptWhenChecked> | ||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/ | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| Line 23: | Line 22: | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: | [[Category: Large Structures]] | ||
[[Category: Chang | [[Category: Levilactobacillus brevis ATCC 367]] | ||
[[Category: Cui | [[Category: Chang C]] | ||
[[Category: Edwards | [[Category: Cui H]] | ||
[[Category: Joachimiak | [[Category: Edwards A]] | ||
[[Category: Joachimiak A]] | |||
[[Category: Savchenko | [[Category: Savchenko A]] | ||
[[Category: Xu | [[Category: Xu X]] | ||
Latest revision as of 09:25, 27 November 2024
Crystal structure of putative methyltransferase from Lactobacillus brevisCrystal structure of putative methyltransferase from Lactobacillus brevis
Structural highlights
FunctionQ03SR9_LEVBA Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.[HAMAP-Rule:MF_01877] Evolutionary Conservation Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf. |
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