3kwp: Difference between revisions

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-{{STRUCTURE_3kwp|  PDB=3kwp  |  SCENE=  }}
-===Crystal structure of putative methyltransferase from Lactobacillus brevis===
-==Function==
+==Crystal structure of putative methyltransferase from Lactobacillus brevis==
-[[http://www.uniprot.org/uniprot/Q03SR9_LACBA Q03SR9_LACBA]] Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA (By similarity).[HAMAP-Rule:MF_01877]
+<StructureSection load='3kwp' size='340' side='right'caption='[[3kwp]], [[Resolution|resolution]] 2.29&Aring;' scene=''>
+== Structural highlights ==
-==About this Structure==
+<table><tr><td colspan='2'>[[3kwp]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Levilactobacillus_brevis_ATCC_367 Levilactobacillus brevis ATCC 367]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KWP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3KWP FirstGlance]. <br>
-[[3kwp]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Lactobacillus_brevis_atcc_367 Lactobacillus brevis atcc 367]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KWP OCA].
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.29&#8491;</td></tr>
-[[Category: Lactobacillus brevis atcc 367]]
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene></td></tr>
-[[Category: Chang, C.]]
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3kwp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3kwp OCA], [https://pdbe.org/3kwp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3kwp RCSB], [https://www.ebi.ac.uk/pdbsum/3kwp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3kwp ProSAT]</span></td></tr>
-[[Category: Cui, H.]]
+</table>
-[[Category: Edwards, A.]]
+== Function ==
-[[Category: Joachimiak, A.]]
+[https://www.uniprot.org/uniprot/Q03SR9_LEVBA Q03SR9_LEVBA] Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.[HAMAP-Rule:MF_01877]
-[[Category: MCSG, Midwest Center for Structural Genomics.]]
+== Evolutionary Conservation ==
-[[Category: Savchenko, A.]]
+[[Image:Consurf_key_small.gif|200px|right]]
-[[Category: Xu, X.]]
+Check<jmol>
-[[Category: Lactobacillus brevi]]
+  <jmolCheckbox>
-[[Category: Mcsg]]
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/kw/3kwp_consurf.spt"</scriptWhenChecked>
-[[Category: Methyltransferase]]
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-[[Category: Midwest center for structural genomic]]
+    <text>to colour the structure by Evolutionary Conservation</text>
-[[Category: Protein structure initiative]]
+  </jmolCheckbox>
-[[Category: Psi-2]]
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3kwp ConSurf].
-[[Category: Putative methyltransferase]]
+<div style="clear:both"></div>
-[[Category: S-adenosyl-l-methionine]]
+__TOC__
-[[Category: Structural genomic]]
+</StructureSection>
-[[Category: Transferase]]
+[[Category: Large Structures]]
+[[Category: Levilactobacillus brevis ATCC 367]]
+[[Category: Chang C]]
+[[Category: Cui H]]
+[[Category: Edwards A]]
+[[Category: Joachimiak A]]
+[[Category: Savchenko A]]
+[[Category: Xu X]]