3kux: Difference between revisions

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[[Image:3kux.png|left|200px]]


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==Structure of the YPO2259 putative oxidoreductase from Yersinia pestis==
The line below this paragraph, containing "STRUCTURE_3kux", creates the "Structure Box" on the page.
<StructureSection load='3kux' size='340' side='right'caption='[[3kux]], [[Resolution|resolution]] 2.75&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3kux]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Yersinia_pestis Yersinia pestis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KUX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3KUX FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.75&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
{{STRUCTURE_3kux|  PDB=3kux  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3kux FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3kux OCA], [https://pdbe.org/3kux PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3kux RCSB], [https://www.ebi.ac.uk/pdbsum/3kux PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3kux ProSAT]</span></td></tr>
 
</table>
===Structure of the YPO2259 putative oxidoreductase from Yersinia pestis===
== Function ==
 
[https://www.uniprot.org/uniprot/A0A2S9PM40_YERPE A0A2S9PM40_YERPE]
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
[[3kux]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Yersinia_pestis Yersinia pestis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KUX OCA].  
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ku/3kux_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3kux ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Yersinia pestis]]
[[Category: Yersinia pestis]]
[[Category: Anderson, S M.]]
[[Category: Anderson SM]]
[[Category: Anderson, W F.]]
[[Category: Anderson WF]]
[[Category: Diseases, Center for Structural Genomics of Infectious.]]
[[Category: Edwards, A.]]
[[Category: Gordon, E.]]
[[Category: Kwon, K.]]
[[Category: Savchenko, A.]]
[[Category: Wawrzak, Z.]]
[[Category: Center for structural genomics of infectious disease]]
[[Category: Csgid]]
[[Category: Oxidoreductase]]
[[Category: Oxidoreductase family]]
[[Category: Structural genomic]]
[[Category: Structural genomic]]
[[Category: Edwards A]]
[[Category: Gordon E]]
[[Category: Kwon K]]
[[Category: Savchenko A]]
[[Category: Wawrzak Z]]

Latest revision as of 08:57, 17 October 2024

Structure of the YPO2259 putative oxidoreductase from Yersinia pestisStructure of the YPO2259 putative oxidoreductase from Yersinia pestis

Structural highlights

3kux is a 1 chain structure with sequence from Yersinia pestis. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.75Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

A0A2S9PM40_YERPE

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

3kux, resolution 2.75Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
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