3giu: Difference between revisions

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-[[Image:3giu.png|left|200px]]
-{{STRUCTURE_3giu|  PDB=3giu  |  SCENE=  }}
+==1.25 Angstrom Crystal Structure of Pyrrolidone-Carboxylate Peptidase (pcp) from Staphylococcus aureus==
+<StructureSection load='3giu' size='340' side='right'caption='[[3giu]], [[Resolution|resolution]] 1.25&Aring;' scene=''>
-===1.25 Angstrom Crystal Structure of Pyrrolidone-Carboxylate Peptidase (pcp) from Staphylococcus aureus===
+== Structural highlights ==
+<table><tr><td colspan='2'>[[3giu]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Staphylococcus_aureus_subsp._aureus_COL Staphylococcus aureus subsp. aureus COL]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GIU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3GIU FirstGlance]. <br>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.25&#8491;</td></tr>
-==About this Structure==
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACY:ACETIC+ACID'>ACY</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-[[3giu]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Staphylococcus_aureus_subsp._aureus_col Staphylococcus aureus subsp. aureus col]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GIU OCA].
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3giu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3giu OCA], [https://pdbe.org/3giu PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3giu RCSB], [https://www.ebi.ac.uk/pdbsum/3giu PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3giu ProSAT], [https://www.topsan.org/Proteins/CSGID/3giu TOPSAN]</span></td></tr>
-[[Category: Pyroglutamyl-peptidase I]]
+</table>
-[[Category: Staphylococcus aureus subsp. aureus col]]
+== Function ==
-[[Category: Anderson, W F.]]
+[https://www.uniprot.org/uniprot/PCP_STAAC PCP_STAAC] Removes 5-oxoproline from various penultimate amino acid residues except L-proline (By similarity).
-[[Category: CSGID, Center for Structural Genomics of Infectious Diseases.]]
+== Evolutionary Conservation ==
-[[Category: Minasov, G.]]
+[[Image:Consurf_key_small.gif|200px|right]]
-[[Category: Onopriyenko, O.]]
+Check<jmol>
-[[Category: Peterson, S N.]]
+  <jmolCheckbox>
-[[Category: Savchenko, A.]]
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gi/3giu_consurf.spt"</scriptWhenChecked>
-[[Category: Skarina, T.]]
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-[[Category: Wawrzak, Z.]]
+    <text>to colour the structure by Evolutionary Conservation</text>
-[[Category: Center for structural genomics of infectious disease]]
+  </jmolCheckbox>
-[[Category: Csgid]]
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3giu ConSurf].
-[[Category: Hydrolase]]
+<div style="clear:both"></div>
-[[Category: Idp00836]]
+__TOC__
-[[Category: Protease]]
+</StructureSection>
-[[Category: Pyrrolidone-carboxylate peptidase]]
+[[Category: Large Structures]]
-[[Category: Structural genomic]]
+[[Category: Staphylococcus aureus subsp. aureus COL]]
-[[Category: Thiol protease]]
+[[Category: Anderson WF]]
+[[Category: Minasov G]]
+[[Category: Onopriyenko O]]
+[[Category: Peterson SN]]
+[[Category: Savchenko A]]
+[[Category: Skarina T]]
+[[Category: Wawrzak Z]]