2wv3: Difference between revisions

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-==NEUROPLASTIN-55 BINDS TO AND SIGNALS THROUGH THE FIBROBLAST GROWTH FACTOR RECEPTOR==
-<StructureSection load='2wv3' size='340' side='right' caption='[[2wv3]], [[Resolution|resolution]] 1.95&Aring;' scene=''>
+==Neuroplastin-55 binds to and signals through the fibroblast growth factor receptor==
+<StructureSection load='2wv3' size='340' side='right'caption='[[2wv3]], [[Resolution|resolution]] 1.95&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[2wv3]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Rattus_norvegicus Rattus norvegicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WV3 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2WV3 FirstGlance]. <br>
+<table><tr><td colspan='2'>[[2wv3]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Rattus_norvegicus Rattus norvegicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WV3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2WV3 FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.95&#8491;</td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2wv3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2wv3 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2wv3 RCSB], [http://www.ebi.ac.uk/pdbsum/2wv3 PDBsum]</span></td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2wv3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2wv3 OCA], [https://pdbe.org/2wv3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2wv3 RCSB], [https://www.ebi.ac.uk/pdbsum/2wv3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2wv3 ProSAT]</span></td></tr>
 </table>
 == Function ==
-[[http://www.uniprot.org/uniprot/NPTN_RAT NPTN_RAT]] Probable homophilic and heterophilic cell adhesion molecule involved in long term potentiation at hippocampal excitatory synapses through activation of p38MAPK. May also regulate neurite outgrowth by activating the FGFR1 signaling pathway. May play a role in synaptic plasticity.<ref>PMID:10759566</ref> <ref>PMID:16925595</ref> <ref>PMID:19952283</ref>
+[https://www.uniprot.org/uniprot/NPTN_RAT NPTN_RAT] Probable homophilic and heterophilic cell adhesion molecule involved in long term potentiation at hippocampal excitatory synapses through activation of p38MAPK. May also regulate neurite outgrowth by activating the FGFR1 signaling pathway. May play a role in synaptic plasticity.<ref>PMID:10759566</ref> <ref>PMID:16925595</ref> <ref>PMID:19952283</ref>
 == Evolutionary Conservation ==
 [[Image:Consurf_key_small.gif|200px|right]]
 Check<jmol>
    <jmolCheckbox>
-     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/wv/2wv3_consurf.spt"</scriptWhenChecked>
+     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/wv/2wv3_consurf.spt"</scriptWhenChecked>
-     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
      <text>to colour the structure by Evolutionary Conservation</text>
    </jmolCheckbox>
-</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2wv3 ConSurf].
 <div style="clear:both"></div>
 <div style="background-color:#fffaf0;">
@@ Line 26: / Line 28: @@
 From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 </div>
+<div class="pdbe-citations 2wv3" style="background-color:#fffaf0;"></div>
 == References ==
 <references/>
 __TOC__
 </StructureSection>
+[[Category: Large Structures]]
 [[Category: Rattus norvegicus]]
-[[Category: Berezin, V]]
+[[Category: Berezin V]]
-[[Category: Bock, E]]
+[[Category: Bock E]]
-[[Category: Gajhede, M]]
+[[Category: Gajhede M]]
-[[Category: Kastrup, J S]]
+[[Category: Kastrup JS]]
-[[Category: Owczarek, S]]
+[[Category: Owczarek S]]
-[[Category: Soroka, V]]
+[[Category: Soroka V]]
-[[Category: Cell adhesion]]
-[[Category: Cell membrane]]
-[[Category: Disulfide bond]]
-[[Category: Glycoprotein]]
-[[Category: Igcam]]
-[[Category: Immunoglobulin domain]]
-[[Category: Membrane]]
-[[Category: Transmembrane]]