3k6h: Difference between revisions

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==Crystal structure of a nitroreductase family protein from Agrobacterium tumefaciens str. C58==
==Crystal structure of a nitroreductase family protein from Agrobacterium tumefaciens str. C58==
<StructureSection load='3k6h' size='340' side='right' caption='[[3k6h]], [[Resolution|resolution]] 3.05&Aring;' scene=''>
<StructureSection load='3k6h' size='340' side='right'caption='[[3k6h]], [[Resolution|resolution]] 3.05&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[3k6h]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Agrt5 Agrt5]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3K6H OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3K6H FirstGlance]. <br>
<table><tr><td colspan='2'>[[3k6h]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Agrobacterium_fabrum_str._C58 Agrobacterium fabrum str. C58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3K6H OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3K6H FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.05&#8491;</td></tr>
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">AGR_C_3200, Atu1744 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=176299 AGRT5])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3k6h FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3k6h OCA], [https://pdbe.org/3k6h PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3k6h RCSB], [https://www.ebi.ac.uk/pdbsum/3k6h PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3k6h ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3k6h FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3k6h OCA], [http://pdbe.org/3k6h PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3k6h RCSB], [http://www.ebi.ac.uk/pdbsum/3k6h PDBsum]</span></td></tr>
</table>
</table>
== Evolutionary Conservation ==
== Evolutionary Conservation ==
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Check<jmol>
Check<jmol>
   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/k6/3k6h_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/k6/3k6h_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
   </jmolCheckbox>
   </jmolCheckbox>
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==See Also==
==See Also==
*[[Nitroreductase|Nitroreductase]]
*[[Nitroreductase 3D structures|Nitroreductase 3D structures]]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Agrt5]]
[[Category: Agrobacterium fabrum str. C58]]
[[Category: Cui, H]]
[[Category: Large Structures]]
[[Category: Edwards, A]]
[[Category: Cui H]]
[[Category: Joachimiak, A]]
[[Category: Edwards A]]
[[Category: Structural genomic]]
[[Category: Joachimiak A]]
[[Category: Savchenko, A]]
[[Category: Savchenko A]]
[[Category: Tan, K]]
[[Category: Tan K]]
[[Category: Xu, X]]
[[Category: Xu X]]
[[Category: Agrobacterium tumefaciens str. c58]]
[[Category: Apc5990]]
[[Category: Mcsg]]
[[Category: Nitroreductase family]]
[[Category: Oxidoreductase]]
[[Category: PSI, Protein structure initiative]]

Latest revision as of 05:00, 21 November 2024

Crystal structure of a nitroreductase family protein from Agrobacterium tumefaciens str. C58Crystal structure of a nitroreductase family protein from Agrobacterium tumefaciens str. C58

Structural highlights

3k6h is a 2 chain structure with sequence from Agrobacterium fabrum str. C58. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 3.05Å
Ligands:, ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

3k6h, resolution 3.05Å

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