3iv4: Difference between revisions

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Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

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-{{Seed}}
-[[Image:3iv4.jpg|left|200px]]
-<!--
+==A putative oxidoreductase with a thioredoxin fold==
-The line below this paragraph, containing "STRUCTURE_3iv4", creates the "Structure Box" on the page.
+<StructureSection load='3iv4' size='340' side='right'caption='[[3iv4]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[3iv4]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Staphylococcus_aureus_subsp._aureus_N315 Staphylococcus aureus subsp. aureus N315]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IV4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3IV4 FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.5&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-{{STRUCTURE_3iv4|  PDB=3iv4  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3iv4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3iv4 OCA], [https://pdbe.org/3iv4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3iv4 RCSB], [https://www.ebi.ac.uk/pdbsum/3iv4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3iv4 ProSAT]</span></td></tr>
+</table>
-===A putative oxidoreductase with a thioredoxin fold===
+== Function ==
+[https://www.uniprot.org/uniprot/A0A0H3JTE8_STAAN A0A0H3JTE8_STAAN]
+== Evolutionary Conservation ==
-==About this Structure==
+[[Image:Consurf_key_small.gif|200px|right]]
-IV4 is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Staphylococcus_aureus_subsp._aureus_n315 Staphylococcus aureus subsp. aureus n315]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IV4 OCA].
+Check<jmol>
-[[Category: Staphylococcus aureus subsp. aureus n315]]
+  <jmolCheckbox>
-[[Category: Cui, H.]]
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/iv/3iv4_consurf.spt"</scriptWhenChecked>
-[[Category: Edwards, A.]]
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-[[Category: Fan, Y.]]
+    <text>to colour the structure by Evolutionary Conservation</text>
-[[Category: Joachimiak, A.]]
+  </jmolCheckbox>
-[[Category: MCSG, Midwest Center for Structural Genomics.]]
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3iv4 ConSurf].
-[[Category: Ng, J.]]
+<div style="clear:both"></div>
-[[Category: Savchenko, A.]]
+__TOC__
-[[Category: Xu, X.]]
+</StructureSection>
-[[Category: Apc23140]]
+[[Category: Large Structures]]
-[[Category: Mcsg]]
+[[Category: Staphylococcus aureus subsp. aureus N315]]
-[[Category: Meticillin-resistant staphylococcus aureus]]
+[[Category: Cui H]]
-[[Category: Midwest center for structural genomic]]
+[[Category: Edwards A]]
-[[Category: Oxidoreductase]]
+[[Category: Fan Y]]
-[[Category: Protein structure initiative]]
+[[Category: Joachimiak A]]
-[[Category: Psi-2]]
+[[Category: Ng J]]
-[[Category: Structural genomic]]
+[[Category: Savchenko A]]
-[[Category: Thioredoxin fold]]
+[[Category: Xu X]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Sep 16 09:15:05 2009''