3ist: Difference between revisions

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[[Image:3ist.jpg|left|200px]]


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==Crystal structure of glutamate racemase from Listeria monocytogenes in complex with succinic acid==
The line below this paragraph, containing "STRUCTURE_3ist", creates the "Structure Box" on the page.
<StructureSection load='3ist' size='340' side='right'caption='[[3ist]], [[Resolution|resolution]] 1.65&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)  
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3ist]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Listeria_monocytogenes_EGD-e Listeria monocytogenes EGD-e]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IST OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3IST FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.65&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SIN:SUCCINIC+ACID'>SIN</scene></td></tr>
{{STRUCTURE_3ist| PDB=3ist |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ist FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ist OCA], [https://pdbe.org/3ist PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ist RCSB], [https://www.ebi.ac.uk/pdbsum/3ist PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ist ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/MURI_LISMO MURI_LISMO] Provides the (R)-glutamate required for cell wall biosynthesis (By similarity).
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/is/3ist_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3ist ConSurf].
<div style="clear:both"></div>


===Crystal structure of glutamate racemase from Listeria monocytogenes in complex with succinic acid===
==See Also==
 
*[[Glutamate racemase 3D structures|Glutamate racemase 3D structures]]
 
__TOC__
==About this Structure==
</StructureSection>
3IST is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Listeria_monocytogenes Listeria monocytogenes]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IST OCA].
[[Category: Large Structures]]
[[Category: Glutamate racemase]]
[[Category: Listeria monocytogenes EGD-e]]
[[Category: Listeria monocytogenes]]
[[Category: Anderson WF]]
[[Category: Anderson, W F.]]
[[Category: Bujnicki JM]]
[[Category: Bujnicki, J M.]]
[[Category: Chruszcz M]]
[[Category: CSGID, Center for Structural Genomics of Infectious Diseases.]]
[[Category: Majorek KA]]
[[Category: Chruszcz, M.]]
[[Category: Minor W]]
[[Category: Majorek, K A.]]
[[Category: Onopriyenko O]]
[[Category: Minor, W.]]
[[Category: Savchenko A]]
[[Category: Onopriyenko, O.]]
[[Category: Skarina T]]
[[Category: Savchenko, A.]]
[[Category: Stam J]]
[[Category: Skarina, T.]]
[[Category: Stam, J.]]
[[Category: Cell shape]]
[[Category: Cell wall biogenesis/degradation]]
[[Category: Center for structural genomics of infectious disease]]
[[Category: Csgid]]
[[Category: Glutamate racemase]]
[[Category: Isomerase]]
[[Category: Peptidoglycan synthesis]]
[[Category: Structural genomic]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Sep 23 09:00:52 2009''

Latest revision as of 04:57, 21 November 2024

Crystal structure of glutamate racemase from Listeria monocytogenes in complex with succinic acidCrystal structure of glutamate racemase from Listeria monocytogenes in complex with succinic acid

Structural highlights

3ist is a 2 chain structure with sequence from Listeria monocytogenes EGD-e. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.65Å
Ligands:, ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

MURI_LISMO Provides the (R)-glutamate required for cell wall biosynthesis (By similarity).

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

3ist, resolution 1.65Å

Drag the structure with the mouse to rotate

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OCA
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