3iq1: Difference between revisions

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[[Image:3iq1.jpg|left|200px]]


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==Crystal structure of DPS protein from Vibrio cholerae O1, a member of a broad superfamily of ferritin-like diiron-carboxylate proteins==
The line below this paragraph, containing "STRUCTURE_3iq1", creates the "Structure Box" on the page.
<StructureSection load='3iq1' size='340' side='right'caption='[[3iq1]], [[Resolution|resolution]] 1.67&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3iq1]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Vibrio_cholerae_O1_biovar_El_Tor_str._N16961 Vibrio cholerae O1 biovar El Tor str. N16961]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IQ1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3IQ1 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.67&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
{{STRUCTURE_3iq1| PDB=3iq1 |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3iq1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3iq1 OCA], [https://pdbe.org/3iq1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3iq1 RCSB], [https://www.ebi.ac.uk/pdbsum/3iq1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3iq1 ProSAT], [https://www.topsan.org/Proteins/CSGID/3iq1 TOPSAN]</span></td></tr>
</table>
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/iq/3iq1_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3iq1 ConSurf].
<div style="clear:both"></div>


===Crystal structure of DPS protein from Vibrio cholerae O1, a member of a broad superfamily of ferritin-like diiron-carboxylate proteins===
==See Also==
 
*[[Ferritin 3D structures|Ferritin 3D structures]]
 
__TOC__
==About this Structure==
</StructureSection>
3IQ1 is a 4 chains structure of sequences from [http://en.wikipedia.org/wiki/Vibrio_cholerae_o1_biovar_el_tor_str._n16961 Vibrio cholerae o1 biovar el tor str. n16961]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IQ1 OCA].
[[Category: Large Structures]]
[[Category: Vibrio cholerae o1 biovar el tor str. n16961]]
[[Category: Vibrio cholerae O1 biovar El Tor str. N16961]]
[[Category: Anderson, W.]]
[[Category: Anderson W]]
[[Category: Gu, M.]]
[[Category: Gu M]]
[[Category: Joachimiak, A.]]
[[Category: Joachimiak A]]
[[Category: Nocek, B.]]
[[Category: Nocek B]]
[[Category: Otwinowski, Z.]]
[[Category: Otwinowski Z]]
[[Category: Peterson, S.]]
[[Category: Peterson S]]
[[Category: Center for structural genomics of infectious disease]]
[[Category: Csgid]]
[[Category: Dps family protein]]
[[Category: Metal transport]]
[[Category: Niaid]]
[[Category: Sad]]
[[Category: Structural genomic]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Sep  9 09:53:01 2009''

Latest revision as of 04:57, 21 November 2024

Crystal structure of DPS protein from Vibrio cholerae O1, a member of a broad superfamily of ferritin-like diiron-carboxylate proteinsCrystal structure of DPS protein from Vibrio cholerae O1, a member of a broad superfamily of ferritin-like diiron-carboxylate proteins

Structural highlights

3iq1 is a 4 chain structure with sequence from Vibrio cholerae O1 biovar El Tor str. N16961. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.67Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

3iq1, resolution 1.67Å

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