3ip1: Difference between revisions

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-{{STRUCTURE_3ip1|  PDB=3ip1  |  SCENE=  }}
-===Structure of putative alcohol dehydrogenase (TM_042) from Thermotoga maritima===
-==About this Structure==
+==Structure of putative alcohol dehydrogenase (TM_042) from Thermotoga maritima==
-[[3ip1]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IP1 OCA].
+<StructureSection load='3ip1' size='340' side='right'caption='[[3ip1]], [[Resolution|resolution]] 2.09&Aring;' scene=''>
-[[Category: Thermotoga maritima]]
+== Structural highlights ==
-[[Category: Almo, S C.]]
+<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IP1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3IP1 FirstGlance]. <br>
-[[Category: Burley, S K.]]
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.09&#8491;</td></tr>
-[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics.]]
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CD:CADMIUM+ION'>CD</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-[[Category: Ramagopal, U A.]]
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ip1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ip1 OCA], [https://pdbe.org/3ip1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ip1 RCSB], [https://www.ebi.ac.uk/pdbsum/3ip1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ip1 ProSAT]</span></td></tr>
-[[Category: Toro, R.]]
+</table>
-[[Category: Alcohol dehydrogenase]]
+== Evolutionary Conservation ==
-[[Category: Metal-binding]]
+[[Image:Consurf_key_small.gif|200px|right]]
-[[Category: New york sgx research center for structural genomic]]
+Check<jmol>
-[[Category: Nysgxrc]]
+  <jmolCheckbox>
-[[Category: Oxidoreductase]]
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ip/3ip1_consurf.spt"</scriptWhenChecked>
-[[Category: Protein structure initiative]]
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-[[Category: Psi-2]]
+    <text>to colour the structure by Evolutionary Conservation</text>
-[[Category: Structural genomic]]
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3ip1 ConSurf].
+<div style="clear:both"></div>
+==See Also==
+*[[Alcohol dehydrogenase 3D structures|Alcohol dehydrogenase 3D structures]]
+__TOC__
+</StructureSection>
+[[Category: Large Structures]]
+[[Category: Almo SC]]
+[[Category: Burley SK]]
+[[Category: Ramagopal UA]]
+[[Category: Toro R]]