3ifd: Difference between revisions

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Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

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 ==Human synthetic monocyte chemoattractant protein 1 (MCP-1)==
-<StructureSection load='3ifd' size='340' side='right' caption='[[3ifd]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
+<StructureSection load='3ifd' size='340' side='right'caption='[[3ifd]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[3ifd]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IFD OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3IFD FirstGlance]. <br>
+<table><tr><td colspan='2'>[[3ifd]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IFD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3IFD FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ifd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ifd OCA], [http://pdbe.org/3ifd PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3ifd RCSB], [http://www.ebi.ac.uk/pdbsum/3ifd PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3ifd ProSAT]</span></td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ifd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ifd OCA], [https://pdbe.org/3ifd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ifd RCSB], [https://www.ebi.ac.uk/pdbsum/3ifd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ifd ProSAT]</span></td></tr>
 </table>
 == Function ==
-[[http://www.uniprot.org/uniprot/CCL2_HUMAN CCL2_HUMAN]] Chemotactic factor that attracts monocytes and basophils but not neutrophils or eosinophils. Augments monocyte anti-tumor activity. Has been implicated in the pathogenesis of diseases characterized by monocytic infiltrates, like psoriasis, rheumatoid arthritis or atherosclerosis. May be involved in the recruitment of monocytes into the arterial wall during the disease process of atherosclerosis.
+[https://www.uniprot.org/uniprot/CCL2_HUMAN CCL2_HUMAN] Chemotactic factor that attracts monocytes and basophils but not neutrophils or eosinophils. Augments monocyte anti-tumor activity. Has been implicated in the pathogenesis of diseases characterized by monocytic infiltrates, like psoriasis, rheumatoid arthritis or atherosclerosis. May be involved in the recruitment of monocytes into the arterial wall during the disease process of atherosclerosis.
 == Evolutionary Conservation ==
 [[Image:Consurf_key_small.gif|200px|right]]
@@ Line 14: / Line 15: @@
    <jmolCheckbox>
      <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/if/3ifd_consurf.spt"</scriptWhenChecked>
-     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
      <text>to colour the structure by Evolutionary Conservation</text>
    </jmolCheckbox>
@@ Line 28: / Line 29: @@
 </div>
 <div class="pdbe-citations 3ifd" style="background-color:#fffaf0;"></div>
-==See Also==
-*[[User:Coline Perrin/CCL2|User:Coline Perrin/CCL2]]
 == References ==
 <references/>
 __TOC__
 </StructureSection>
-[[Category: Gilliland, G L]]
+[[Category: Homo sapiens]]
-[[Category: Obmolova, G]]
+[[Category: Large Structures]]
-[[Category: Teplyakov, A]]
+[[Category: Gilliland GL]]
-[[Category: Chemokine]]
+[[Category: Obmolova G]]
-[[Category: Chemotaxis]]
+[[Category: Teplyakov A]]
-[[Category: Cytokine]]
-[[Category: Disulfide bond]]
-[[Category: Glycoprotein]]
-[[Category: Inflammatory response]]
-[[Category: Peptide synthesis]]
-[[Category: Pyrrolidone carboxylic acid]]
-[[Category: Quarternary structure]]
-[[Category: Secreted]]