3ibs: Difference between revisions
Jump to navigation
Jump to search
No edit summary |
No edit summary |
||
| (One intermediate revision by the same user not shown) | |||
| Line 1: | Line 1: | ||
==Crystal structure of conserved hypothetical protein BatB from Bacteroides thetaiotaomicron== | ==Crystal structure of conserved hypothetical protein BatB from Bacteroides thetaiotaomicron== | ||
<StructureSection load='3ibs' size='340' side='right' caption='[[3ibs]], [[Resolution|resolution]] 2.10Å' scene=''> | <StructureSection load='3ibs' size='340' side='right'caption='[[3ibs]], [[Resolution|resolution]] 2.10Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[3ibs]] is a 2 chain structure with sequence from [ | <table><tr><td colspan='2'>[[3ibs]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacteroides_thetaiotaomicron Bacteroides thetaiotaomicron]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IBS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3IBS FirstGlance]. <br> | ||
</td></tr><tr id=' | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1Å</td></tr> | ||
<tr id=' | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | ||
< | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ibs FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ibs OCA], [https://pdbe.org/3ibs PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ibs RCSB], [https://www.ebi.ac.uk/pdbsum/3ibs PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ibs ProSAT]</span></td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | |||
</table> | </table> | ||
== Function == | |||
[https://www.uniprot.org/uniprot/Q8A9A9_BACTN Q8A9A9_BACTN] | |||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
| Line 14: | Line 15: | ||
<jmolCheckbox> | <jmolCheckbox> | ||
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ib/3ibs_consurf.spt"</scriptWhenChecked> | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ib/3ibs_consurf.spt"</scriptWhenChecked> | ||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/ | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| Line 21: | Line 22: | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: | [[Category: Bacteroides thetaiotaomicron]] | ||
[[Category: Bearden | [[Category: Large Structures]] | ||
[[Category: Borek | [[Category: Bearden J]] | ||
[[Category: Hattne | [[Category: Borek D]] | ||
[[Category: Joachimiak | [[Category: Hattne J]] | ||
[[Category: Joachimiak A]] | |||
[[Category: Nakka | [[Category: Nakka C]] | ||
[[Category: Otwinowski | [[Category: Otwinowski Z]] | ||
[[Category: Sather | [[Category: Sather A]] | ||
Latest revision as of 09:19, 27 November 2024
Crystal structure of conserved hypothetical protein BatB from Bacteroides thetaiotaomicronCrystal structure of conserved hypothetical protein BatB from Bacteroides thetaiotaomicron
Structural highlights
FunctionEvolutionary Conservation Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf. |
| ||||||||||||||||||