3hqx: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
← Older edit
No edit summary
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{Seed}}
[[Image:3hqx.jpg|left|200px]]


<!--
==Crystal structure of protein of unknown function (DUF1255,PF06865) from Acinetobacter sp. ADP1==
The line below this paragraph, containing "STRUCTURE_3hqx", creates the "Structure Box" on the page.
<StructureSection load='3hqx' size='340' side='right'caption='[[3hqx]], [[Resolution|resolution]] 1.66&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3hqx]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Acinetobacter_baylyi_ADP1 Acinetobacter baylyi ADP1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HQX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3HQX FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.66&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
{{STRUCTURE_3hqx|  PDB=3hqx  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3hqx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3hqx OCA], [https://pdbe.org/3hqx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3hqx RCSB], [https://www.ebi.ac.uk/pdbsum/3hqx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3hqx ProSAT], [https://www.topsan.org/Proteins/MCSG/3hqx TOPSAN]</span></td></tr>
 
</table>
===Crystal structure of protein of unknown function (DUF1255,PF06865) from Acinetobacter sp. ADP1===
== Function ==
 
[https://www.uniprot.org/uniprot/PPNP_ACIAD PPNP_ACIAD] Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases. Can use uridine, adenosine, guanosine, cytidine, thymidine, inosine and xanthosine as substrates. Also catalyzes the reverse reactions.[HAMAP-Rule:MF_01537]
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
3HQX is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Acinetobacter_sp._adp1 Acinetobacter sp. adp1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HQX OCA].  
Check<jmol>
[[Category: Acinetobacter sp. adp1]]
  <jmolCheckbox>
[[Category: Dauter, Z.]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/hq/3hqx_consurf.spt"</scriptWhenChecked>
[[Category: Freeman, L.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: Hatzos, C.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Joachimiak, A.]]
  </jmolCheckbox>
[[Category: MCSG, Midwest Center for Structural Genomics.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3hqx ConSurf].
[[Category: Nocek, B.]]
<div style="clear:both"></div>
[[Category: Duf1255]]
__TOC__
[[Category: Mcsg]]
</StructureSection>
[[Category: Midwest center for structural genomic]]
[[Category: Acinetobacter baylyi ADP1]]
[[Category: Pf06865]]
[[Category: Large Structures]]
[[Category: Protein structure initiative]]
[[Category: Dauter Z]]
[[Category: Psi2]]
[[Category: Freeman L]]
[[Category: Structural genomic]]
[[Category: Hatzos C]]
[[Category: Unknown function]]
[[Category: Joachimiak A]]
 
[[Category: Nocek B]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jul  1 09:43:02 2009''

Latest revision as of 08:53, 17 October 2024

Crystal structure of protein of unknown function (DUF1255,PF06865) from Acinetobacter sp. ADP1Crystal structure of protein of unknown function (DUF1255,PF06865) from Acinetobacter sp. ADP1

Structural highlights

3hqx is a 1 chain structure with sequence from Acinetobacter baylyi ADP1. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.66Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

PPNP_ACIAD Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases. Can use uridine, adenosine, guanosine, cytidine, thymidine, inosine and xanthosine as substrates. Also catalyzes the reverse reactions.[HAMAP-Rule:MF_01537]

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

3hqx, resolution 1.66Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
Retrieved from "https://proteopedia.openfox.io/wiki/index.php?title=3hqx&oldid=4207923"