3hdc: Difference between revisions

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{{STRUCTURE_3hdc|  PDB=3hdc  |  SCENE=  }}
===The crystal structure of thioredoxin protein from Geobacter metallireducens===


==About this Structure==
==The crystal structure of thioredoxin protein from Geobacter metallireducens==
[[3hdc]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Geobacter_metallireducens_gs-15 Geobacter metallireducens gs-15]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HDC OCA].  
<StructureSection load='3hdc' size='340' side='right'caption='[[3hdc]], [[Resolution|resolution]] 1.77&Aring;' scene=''>
[[Category: Geobacter metallireducens gs-15]]
== Structural highlights ==
[[Category: Burley, S K.]]
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HDC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3HDC FirstGlance]. <br>
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics.]]
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.771&#8491;</td></tr>
[[Category: Swaminathan, S.]]
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
[[Category: Zhang, Z.]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3hdc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3hdc OCA], [https://pdbe.org/3hdc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3hdc RCSB], [https://www.ebi.ac.uk/pdbsum/3hdc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3hdc ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/3hdc TOPSAN]</span></td></tr>
[[Category: 11211i]]
</table>
[[Category: Atcc53774]]
== Evolutionary Conservation ==
[[Category: Dsm 7210]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: Geobacter metallireducen]]
Check<jmol>
[[Category: Gs-15]]
  <jmolCheckbox>
[[Category: New york sgx research center for structural genomic]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/hd/3hdc_consurf.spt"</scriptWhenChecked>
[[Category: Nysgxrc]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: Oxidoreductase]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Protein structure initiative]]
  </jmolCheckbox>
[[Category: Psi-2]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3hdc ConSurf].
[[Category: Structural genomic]]
<div style="clear:both"></div>
[[Category: Thioredoxin]]
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Burley SK]]
[[Category: Swaminathan S]]
[[Category: Zhang Z]]

Latest revision as of 12:13, 30 October 2024

The crystal structure of thioredoxin protein from Geobacter metallireducensThe crystal structure of thioredoxin protein from Geobacter metallireducens

Structural highlights

Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.771Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

3hdc, resolution 1.77Å

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