3h4o: Difference between revisions

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-{{Seed}}
-[[Image:3h4o.jpg|left|200px]]
-<!--
+==Crystal structure of a nitroreductase family protein (cd3355) from clostridium difficile 630 at 1.50 A resolution==
-The line below this paragraph, containing "STRUCTURE_3h4o", creates the "Structure Box" on the page.
+<StructureSection load='3h4o' size='340' side='right'caption='[[3h4o]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[3h4o]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Clostridioides_difficile_630 Clostridioides difficile 630]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3H4O OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3H4O FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.5&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene>, <scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene>, <scene name='pdbligand=MRD:(4R)-2-METHYLPENTANE-2,4-DIOL'>MRD</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-{{STRUCTURE_3h4o|  PDB=3h4o  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3h4o FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3h4o OCA], [https://pdbe.org/3h4o PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3h4o RCSB], [https://www.ebi.ac.uk/pdbsum/3h4o PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3h4o ProSAT], [https://www.topsan.org/Proteins/JCSG/3h4o TOPSAN]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/Q180K0_CLOD6 Q180K0_CLOD6]
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/h4/3h4o_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3h4o ConSurf].
+<div style="clear:both"></div>
-===Crystal structure of NITROREDUCTASE FAMILY PROTEIN (YP_001089872.1) from CLOSTRIDIUM DIFFICILE 630 at 1.50 A resolution===
+==See Also==
+*[[Nitroreductase 3D structures|Nitroreductase 3D structures]]
+__TOC__
-==About this Structure==
+</StructureSection>
-H4O is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Clostridium_difficile_630 Clostridium difficile 630]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3H4O OCA].
+[[Category: Clostridioides difficile 630]]
-[[Category: Clostridium difficile 630]]
+[[Category: Large Structures]]
-[[Category: JCSG, Joint Center for Structural Genomics.]]
-[[Category: Jcsg]]
-[[Category: Joint center for structural genomic]]
-[[Category: Nitroreductase family protein]]
-[[Category: Oxidoreductase]]
-[[Category: Protein structure initiative]]
-[[Category: Psi-2]]
-[[Category: Structural genomic]]
-[[Category: Yp_001089872 1]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed May 20 18:05:31 2009''