3h2y: Difference between revisions

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==Crystal structure of YqeH GTPase from Bacillus anthracis with dGDP bound==
==Crystal structure of YqeH GTPase from Bacillus anthracis with dGDP bound==
<StructureSection load='3h2y' size='340' side='right' caption='[[3h2y]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
<StructureSection load='3h2y' size='340' side='right'caption='[[3h2y]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[3h2y]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacillus_anthracis_(strain_sterne) Bacillus anthracis (strain sterne)]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3H2Y OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3H2Y FirstGlance]. <br>
<table><tr><td colspan='2'>[[3h2y]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_anthracis_str._Sterne Bacillus anthracis str. Sterne]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3H2Y OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3H2Y FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=DGI:2-DEOXYGUANOSINE-5-DIPHOSPHATE'>DGI</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DGI:2-DEOXYGUANOSINE-5-DIPHOSPHATE'>DGI</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">BAS4233, BA_4562, GBAA4562, GBAA_4562, YqeH ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=260799 Bacillus anthracis (strain Sterne)])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3h2y FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3h2y OCA], [https://pdbe.org/3h2y PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3h2y RCSB], [https://www.ebi.ac.uk/pdbsum/3h2y PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3h2y ProSAT], [https://www.topsan.org/Proteins/CSGID/3h2y TOPSAN]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3h2y FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3h2y OCA], [http://pdbe.org/3h2y PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3h2y RCSB], [http://www.ebi.ac.uk/pdbsum/3h2y PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3h2y ProSAT], [http://www.topsan.org/Proteins/CSGID/3h2y TOPSAN]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/A0A1J9WBB5_BACAN A0A1J9WBB5_BACAN]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/h2/3h2y_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/h2/3h2y_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
   </jmolCheckbox>
   </jmolCheckbox>
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Anderson, S M]]
[[Category: Bacillus anthracis str. Sterne]]
[[Category: Anderson, W F]]
[[Category: Large Structures]]
[[Category: Brunzelle, J S]]
[[Category: Anderson SM]]
[[Category: Structural genomic]]
[[Category: Anderson WF]]
[[Category: Savchenko, A]]
[[Category: Brunzelle JS]]
[[Category: Xu, X]]
[[Category: Savchenko A]]
[[Category: Csgid]]
[[Category: Xu X]]
[[Category: Gtp-binding protein yqeh]]
[[Category: Hydrolase]]
[[Category: Idp90222]]
[[Category: Possibly involved in replication initiation]]

Latest revision as of 12:13, 30 October 2024

Crystal structure of YqeH GTPase from Bacillus anthracis with dGDP boundCrystal structure of YqeH GTPase from Bacillus anthracis with dGDP bound

Structural highlights

3h2y is a 1 chain structure with sequence from Bacillus anthracis str. Sterne. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.8Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

A0A1J9WBB5_BACAN

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

3h2y, resolution 1.80Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA