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==2.05 Angstrom structure of a divalent-cation tolerance protein (CutA) from Yersinia pestis== | ==2.05 Angstrom structure of a divalent-cation tolerance protein (CutA) from Yersinia pestis== | ||
<StructureSection load='3gsd' size='340' side='right' caption='[[3gsd]], [[Resolution|resolution]] 2.05Å' scene=''> | <StructureSection load='3gsd' size='340' side='right'caption='[[3gsd]], [[Resolution|resolution]] 2.05Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[3gsd]] is a 12 chain structure with sequence from [ | <table><tr><td colspan='2'>[[3gsd]] is a 12 chain structure with sequence from [https://en.wikipedia.org/wiki/Yersinia_pestis_CO92 Yersinia pestis CO92]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GSD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3GSD FirstGlance]. <br> | ||
</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=EPE:4-(2-HYDROXYETHYL)-1-PIPERAZINE+ETHANESULFONIC+ACID'>EPE</scene>, <scene name='pdbligand= | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.05Å</td></tr> | ||
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=EPE:4-(2-HYDROXYETHYL)-1-PIPERAZINE+ETHANESULFONIC+ACID'>EPE</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene></td></tr> | |||
<tr | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3gsd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gsd OCA], [https://pdbe.org/3gsd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3gsd RCSB], [https://www.ebi.ac.uk/pdbsum/3gsd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3gsd ProSAT], [https://www.topsan.org/Proteins/CSGID/3gsd TOPSAN]</span></td></tr> | ||
</table> | |||
<table> | == Function == | ||
[https://www.uniprot.org/uniprot/CUTA_YERPE CUTA_YERPE] Involved in resistance toward heavy metals (By similarity). | |||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gs/3gsd_consurf.spt"</scriptWhenChecked> | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gs/3gsd_consurf.spt"</scriptWhenChecked> | ||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/ | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3gsd ConSurf]. | ||
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
==See Also== | ==See Also== | ||
*[[CutA1|CutA1]] | *[[CutA1 3D structures|CutA1 3D structures]] | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: | [[Category: Large Structures]] | ||
[[Category: | [[Category: Yersinia pestis CO92]] | ||
[[Category: | [[Category: Anderson WF]] | ||
[[Category: Minasov | [[Category: Minasov G]] | ||
[[Category: Onopriyenko | [[Category: Onopriyenko O]] | ||
[[Category: Peterson | [[Category: Peterson SN]] | ||
[[Category: Savchenko | [[Category: Savchenko A]] | ||
[[Category: Skarina | [[Category: Skarina T]] | ||
[[Category: Wawrzak | [[Category: Wawrzak Z]] | ||
Latest revision as of 12:55, 6 November 2024
2.05 Angstrom structure of a divalent-cation tolerance protein (CutA) from Yersinia pestis2.05 Angstrom structure of a divalent-cation tolerance protein (CutA) from Yersinia pestis
Structural highlights
FunctionCUTA_YERPE Involved in resistance toward heavy metals (By similarity). Evolutionary Conservation Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf. See Also |
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