3gsd: Difference between revisions

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-[[Image:3gsd.png|left|200px]]
-{{STRUCTURE_3gsd|  PDB=3gsd  |  SCENE=  }}
+==2.05 Angstrom structure of a divalent-cation tolerance protein (CutA) from Yersinia pestis==
+<StructureSection load='3gsd' size='340' side='right'caption='[[3gsd]], [[Resolution|resolution]] 2.05&Aring;' scene=''>
-===2.05 Angstrom structure of a divalent-cation tolerance protein (CutA) from Yersinia pestis===
+== Structural highlights ==
+<table><tr><td colspan='2'>[[3gsd]] is a 12 chain structure with sequence from [https://en.wikipedia.org/wiki/Yersinia_pestis_CO92 Yersinia pestis CO92]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GSD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3GSD FirstGlance]. <br>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.05&#8491;</td></tr>
-==About this Structure==
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=EPE:4-(2-HYDROXYETHYL)-1-PIPERAZINE+ETHANESULFONIC+ACID'>EPE</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene></td></tr>
-[[3gsd]] is a 12 chain structure with sequence from [http://en.wikipedia.org/wiki/Yersinia_pestis_co92 Yersinia pestis co92]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GSD OCA].
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3gsd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gsd OCA], [https://pdbe.org/3gsd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3gsd RCSB], [https://www.ebi.ac.uk/pdbsum/3gsd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3gsd ProSAT], [https://www.topsan.org/Proteins/CSGID/3gsd TOPSAN]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/CUTA_YERPE CUTA_YERPE] Involved in resistance toward heavy metals (By similarity).
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gs/3gsd_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3gsd ConSurf].
+<div style="clear:both"></div>
 ==See Also==
-*[[CutA1|CutA1]]
+*[[CutA1 3D structures|CutA1 3D structures]]
-[[Category: Yersinia pestis co92]]
+__TOC__
-[[Category: Anderson, W F.]]
+</StructureSection>
-[[Category: CSGID, Center for Structural Genomics of Infectious Diseases.]]
+[[Category: Large Structures]]
-[[Category: Minasov, G.]]
+[[Category: Yersinia pestis CO92]]
-[[Category: Onopriyenko, O.]]
+[[Category: Anderson WF]]
-[[Category: Peterson, S N.]]
+[[Category: Minasov G]]
-[[Category: Savchenko, A.]]
+[[Category: Onopriyenko O]]
-[[Category: Skarina, T.]]
+[[Category: Peterson SN]]
-[[Category: Wawrzak, Z.]]
+[[Category: Savchenko A]]
-[[Category: Center for structural genomics of infectious disease]]
+[[Category: Skarina T]]
-[[Category: Csgid]]
+[[Category: Wawrzak Z]]
-[[Category: Cuta]]
-[[Category: Divalent-cation tolerance protein]]
-[[Category: Idp00456]]
-[[Category: Metal binding protein]]
-[[Category: Metal-binding]]
-[[Category: Structural genomic]]