3gsd: Difference between revisions

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[[Image:3gsd.png|left|200px]]


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==2.05 Angstrom structure of a divalent-cation tolerance protein (CutA) from Yersinia pestis==
The line below this paragraph, containing "STRUCTURE_3gsd", creates the "Structure Box" on the page.
<StructureSection load='3gsd' size='340' side='right'caption='[[3gsd]], [[Resolution|resolution]] 2.05&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)  
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3gsd]] is a 12 chain structure with sequence from [https://en.wikipedia.org/wiki/Yersinia_pestis_CO92 Yersinia pestis CO92]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GSD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3GSD FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.05&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=EPE:4-(2-HYDROXYETHYL)-1-PIPERAZINE+ETHANESULFONIC+ACID'>EPE</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene></td></tr>
{{STRUCTURE_3gsd| PDB=3gsd |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3gsd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gsd OCA], [https://pdbe.org/3gsd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3gsd RCSB], [https://www.ebi.ac.uk/pdbsum/3gsd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3gsd ProSAT], [https://www.topsan.org/Proteins/CSGID/3gsd TOPSAN]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/CUTA_YERPE CUTA_YERPE] Involved in resistance toward heavy metals (By similarity).
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gs/3gsd_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3gsd ConSurf].
<div style="clear:both"></div>


===2.05 Angstrom structure of a divalent-cation tolerance protein (CutA) from Yersinia pestis===
==See Also==
 
*[[CutA1 3D structures|CutA1 3D structures]]
 
__TOC__
==About this Structure==
</StructureSection>
3GSD is a 12 chains structure of sequences from [http://en.wikipedia.org/wiki/Yersinia_pestis_co92 Yersinia pestis co92]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GSD OCA].
[[Category: Large Structures]]
[[Category: Yersinia pestis co92]]
[[Category: Yersinia pestis CO92]]
[[Category: Anderson, W F.]]
[[Category: Anderson WF]]
[[Category: CSGID, Center for Structural Genomics of Infectious Diseases.]]
[[Category: Minasov G]]
[[Category: Minasov, G.]]
[[Category: Onopriyenko O]]
[[Category: Onopriyenko, O.]]
[[Category: Peterson SN]]
[[Category: Savchenko, A.]]
[[Category: Savchenko A]]
[[Category: Scott, P.]]
[[Category: Skarina T]]
[[Category: Skarina, T.]]
[[Category: Wawrzak Z]]
[[Category: Wawrzak, Z.]]
[[Category: Center for structural genomics of infectious disease]]
[[Category: Copper]]
[[Category: Csgid]]
[[Category: Cuta]]
[[Category: Cytoplasm]]
[[Category: Divalent-cation tolerance protein]]
[[Category: Idp00456]]
[[Category: Metal binding protein]]
[[Category: Metal-binding]]
[[Category: Structural genomic]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Oct 28 21:05:48 2009''

Latest revision as of 12:55, 6 November 2024

2.05 Angstrom structure of a divalent-cation tolerance protein (CutA) from Yersinia pestis2.05 Angstrom structure of a divalent-cation tolerance protein (CutA) from Yersinia pestis

Structural highlights

3gsd is a 12 chain structure with sequence from Yersinia pestis CO92. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.05Å
Ligands:, , , ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

CUTA_YERPE Involved in resistance toward heavy metals (By similarity).

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

3gsd, resolution 2.05Å

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