3gmf: Difference between revisions

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==Crystal structure of protein-disulfide isomerase from Novosphingobium aromaticivorans==
The line below this paragraph, containing "STRUCTURE_3gmf", creates the "Structure Box" on the page.
<StructureSection load='3gmf' size='340' side='right'caption='[[3gmf]], [[Resolution|resolution]] 1.76&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GMF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3GMF FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.76&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr>
{{STRUCTURE_3gmf|  PDB=3gmf  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3gmf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gmf OCA], [https://pdbe.org/3gmf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3gmf RCSB], [https://www.ebi.ac.uk/pdbsum/3gmf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3gmf ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/3gmf TOPSAN]</span></td></tr>
 
</table>
===Crystal structure of protein-disulfide isomerase from Novosphingobium aromaticivorans===
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
 
Check<jmol>
==About this Structure==
  <jmolCheckbox>
3GMF is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Novosphingobium_aromaticivorans_dsm_12444 Novosphingobium aromaticivorans dsm 12444]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GMF OCA].  
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gm/3gmf_consurf.spt"</scriptWhenChecked>
[[Category: Novosphingobium aromaticivorans dsm 12444]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: Almo, S C.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Burley, S K.]]
  </jmolCheckbox>
[[Category: Chang, S.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3gmf ConSurf].
[[Category: Freeman, J.]]
<div style="clear:both"></div>
[[Category: Morano, C.]]
__TOC__
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics.]]
</StructureSection>
[[Category: Patskovsky, Y.]]
[[Category: Large Structures]]
[[Category: Ramagopal, U A.]]
[[Category: Almo SC]]
[[Category: Sauder, J M.]]
[[Category: Burley SK]]
[[Category: Toro, R.]]
[[Category: Chang S]]
[[Category: Disulfide isomerase]]
[[Category: Freeman J]]
[[Category: Isomerase]]
[[Category: Morano C]]
[[Category: New york sgx research center for structural genomic]]
[[Category: Patskovsky Y]]
[[Category: Nysgxrc]]
[[Category: Ramagopal UA]]
[[Category: Oxidoreductase]]
[[Category: Sauder JM]]
[[Category: Protein structure initiative]]
[[Category: Toro R]]
[[Category: Psi-2]]
[[Category: Structural genomic]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Mar 25 12:52:16 2009''

Latest revision as of 04:51, 21 November 2024

Crystal structure of protein-disulfide isomerase from Novosphingobium aromaticivoransCrystal structure of protein-disulfide isomerase from Novosphingobium aromaticivorans

Structural highlights

Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.76Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

3gmf, resolution 1.76Å

Drag the structure with the mouse to rotate

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OCA
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