3gnj: Difference between revisions

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{{Seed}}
[[Image:3gnj.png|left|200px]]


<!--
==The crystal structure of a thioredoxin-related protein from Desulfitobacterium hafniense DCB==
The line below this paragraph, containing "STRUCTURE_3gnj", creates the "Structure Box" on the page.
<StructureSection load='3gnj' size='340' side='right'caption='[[3gnj]], [[Resolution|resolution]] 1.99&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3gnj]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Desulfitobacterium_hafniense_DCB-2 Desulfitobacterium hafniense DCB-2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GNJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3GNJ FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.99&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
{{STRUCTURE_3gnj|  PDB=3gnj  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3gnj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gnj OCA], [https://pdbe.org/3gnj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3gnj RCSB], [https://www.ebi.ac.uk/pdbsum/3gnj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3gnj ProSAT], [https://www.topsan.org/Proteins/MCSG/3gnj TOPSAN]</span></td></tr>
 
</table>
===The crystal structure of a thioredoxin-related protein from Desulfitobacterium hafniense DCB===
== Function ==
 
[https://www.uniprot.org/uniprot/B8G0E7_DESHD B8G0E7_DESHD]  
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
3GNJ is a 4 chains structure of sequences from [http://en.wikipedia.org/wiki/Bacteria Bacteria]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GNJ OCA].  
Check<jmol>
[[Category: Bacteria]]
  <jmolCheckbox>
[[Category: Babnigg, G.]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gn/3gnj_consurf.spt"</scriptWhenChecked>
[[Category: Gu, M.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: Joachimiak, A.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Kerfeld, C.]]
  </jmolCheckbox>
[[Category: Kinney, J N.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3gnj ConSurf].
[[Category: MCSG, Midwest Center for Structural Genomics.]]
<div style="clear:both"></div>
[[Category: Tan, K.]]
__TOC__
[[Category: Volkart, L.]]
</StructureSection>
[[Category: Apc92103]]
[[Category: Desulfitobacterium hafniense DCB-2]]
[[Category: Desulfitobacterium hafniense dcb]]
[[Category: Large Structures]]
[[Category: Mcsg]]
[[Category: Babnigg G]]
[[Category: Midwest center for structural genomic]]
[[Category: Gu M]]
[[Category: Protein structure initiative]]
[[Category: Joachimiak A]]
[[Category: Psi-2]]
[[Category: Kerfeld C]]
[[Category: Structural genomic]]
[[Category: Kinney JN]]
[[Category: Thioredoxin]]
[[Category: Tan K]]
[[Category: Unknown function]]
[[Category: Volkart L]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed May 27 14:25:40 2009''

Latest revision as of 12:12, 30 October 2024

The crystal structure of a thioredoxin-related protein from Desulfitobacterium hafniense DCBThe crystal structure of a thioredoxin-related protein from Desulfitobacterium hafniense DCB

Structural highlights

3gnj is a 4 chain structure with sequence from Desulfitobacterium hafniense DCB-2. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.99Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

B8G0E7_DESHD

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

3gnj, resolution 1.99Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
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