3ftc: Difference between revisions

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 ==Crystal structure of A. aeolicus KsgA at 1.72-Angstrom resolution==
-<StructureSection load='3ftc' size='340' side='right' caption='[[3ftc]], [[Resolution|resolution]] 1.68&Aring;' scene=''>
+<StructureSection load='3ftc' size='340' side='right'caption='[[3ftc]], [[Resolution|resolution]] 1.68&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[3ftc]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Aquifex_aeolicus Aquifex aeolicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FTC OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3FTC FirstGlance]. <br>
+<table><tr><td colspan='2'>[[3ftc]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Aquifex_aeolicus_VF5 Aquifex aeolicus VF5]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FTC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3FTC FirstGlance]. <br>
-</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1qyr|1qyr]], [[1zq9|1zq9]], [[1g38|1g38]], [[3ftd|3ftd]], [[3fte|3fte]], [[3ftf|3ftf]]</td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.68&#8491;</td></tr>
-<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">aq_1816, ksgA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=63363 Aquifex aeolicus])</td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ftc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ftc OCA], [https://pdbe.org/3ftc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ftc RCSB], [https://www.ebi.ac.uk/pdbsum/3ftc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ftc ProSAT]</span></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ftc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ftc OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3ftc RCSB], [http://www.ebi.ac.uk/pdbsum/3ftc PDBsum]</span></td></tr>
 </table>
 == Function ==
-[[http://www.uniprot.org/uniprot/KSGA_AQUAE KSGA_AQUAE]] Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.[HAMAP-Rule:MF_00607]
+[https://www.uniprot.org/uniprot/RSMA_AQUAE RSMA_AQUAE] Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits (By similarity).
 == Evolutionary Conservation ==
 [[Image:Consurf_key_small.gif|200px|right]]
 Check<jmol>
    <jmolCheckbox>
-     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ft/3ftc_consurf.spt"</scriptWhenChecked>
+     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ft/3ftc_consurf.spt"</scriptWhenChecked>
-     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
      <text>to colour the structure by Evolutionary Conservation</text>
    </jmolCheckbox>
-</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3ftc ConSurf].
 <div style="clear:both"></div>
 <div style="background-color:#fffaf0;">
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 From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 </div>
+<div class="pdbe-citations 3ftc" style="background-color:#fffaf0;"></div>
 ==See Also==
-*[[Adenosine dimethyltransferase|Adenosine dimethyltransferase]]
+*[[Adenosine dimethyltransferase 3D structures|Adenosine dimethyltransferase 3D structures]]
 == References ==
 <references/>
 __TOC__
 </StructureSection>
-[[Category: Aquifex aeolicus]]
+[[Category: Aquifex aeolicus VF5]]
-[[Category: Ji, X]]
+[[Category: Large Structures]]
-[[Category: Tu, C]]
+[[Category: Ji X]]
-[[Category: Antibiotic resistance]]
+[[Category: Tu C]]
-[[Category: Ksga]]
-[[Category: Methyltransferase]]
-[[Category: Mtase]]
-[[Category: Rna methyltransferase]]
-[[Category: Rna-binding]]
-[[Category: Rossmann-like fold]]
-[[Category: Rrna processing]]
-[[Category: S-adenosyl-l-methionine]]
-[[Category: Transferase]]